Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc27Q3V036 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc27Q3V036 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc27Q3V036 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc27Q3V036 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc27Q3V036 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc27Q3V036 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc27Q3V036 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc27Q3V036 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc27Q3V036 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc27Q3V036 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc27Q3V036 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc27Q3V036 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc27Q3V036 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.64■□□□□ 0.73
Ccdc27Q3V036 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc27Q3V036 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc27Q3V036 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Ccdc27Q3V036 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc27Q3V036 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc27Q3V036 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc27Q3V036 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Ccdc27Q3V036 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc27Q3V036 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc27Q3V036 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc27Q3V036 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc27Q3V036 Gm13034-201ENSMUST00000121342 3177 ntBASIC19.63■□□□□ 0.73
Ccdc27Q3V036 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc27Q3V036 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc27Q3V036 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc27Q3V036 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc27Q3V036 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc27Q3V036 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.63■□□□□ 0.73
Ccdc27Q3V036 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Ccdc27Q3V036 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc27Q3V036 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc27Q3V036 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc27Q3V036 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc27Q3V036 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc27Q3V036 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc27Q3V036 Gm44443-201ENSMUST00000204396 5633 ntBASIC19.63■□□□□ 0.73
Ccdc27Q3V036 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc27Q3V036 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc27Q3V036 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 Gm15794-201ENSMUST00000120182 631 ntBASIC19.62■□□□□ 0.73
Ccdc27Q3V036 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc27Q3V036 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc27Q3V036 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc27Q3V036 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc27Q3V036 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc27Q3V036 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc27Q3V036 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc27Q3V036 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc27Q3V036 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Ccdc27Q3V036 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.61■□□□□ 0.73
Ccdc27Q3V036 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.61■□□□□ 0.73
Ccdc27Q3V036 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc27Q3V036 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc27Q3V036 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Ccdc27Q3V036 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Ccdc27Q3V036 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc27Q3V036 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc27Q3V036 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc27Q3V036 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc27Q3V036 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc27Q3V036 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc27Q3V036 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc27Q3V036 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc27Q3V036 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc27Q3V036 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.6■□□□□ 0.73
Ccdc27Q3V036 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc27Q3V036 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC19.6■□□□□ 0.73
Ccdc27Q3V036 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc27Q3V036 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc27Q3V036 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc27Q3V036 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc27Q3V036 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc27Q3V036 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc27Q3V036 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms