Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Gm12008-201ENSMUST00000117791 755 ntBASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Thap2-203ENSMUST00000218989 527 ntBASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf223Q3UV31 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf223Q3UV31 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf223Q3UV31 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf223Q3UV31 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf223Q3UV31 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf223Q3UV31 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf223Q3UV31 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf223Q3UV31 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf223Q3UV31 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf223Q3UV31 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf223Q3UV31 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Rnf223Q3UV31 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf223Q3UV31 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rnf223Q3UV31 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf223Q3UV31 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf223Q3UV31 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.88□□□□□ -0.03
Rnf223Q3UV31 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf223Q3UV31 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf223Q3UV31 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Rnf223Q3UV31 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rnf223Q3UV31 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Gm27301-201ENSMUST00000184012 127 ntBASIC14.87□□□□□ -0.03
Rnf223Q3UV31 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf223Q3UV31 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rnf223Q3UV31 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf223Q3UV31 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf223Q3UV31 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf223Q3UV31 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rnf223Q3UV31 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms