Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Fam196aQ3USH1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.39■□□□□ 0.05
Fam196aQ3USH1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Fam196aQ3USH1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Fam196aQ3USH1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Fam196aQ3USH1 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Fam196aQ3USH1 Gm15824-201ENSMUST00000119516 955 ntBASIC15.39■□□□□ 0.05
Fam196aQ3USH1 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.39■□□□□ 0.05
Fam196aQ3USH1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Fam196aQ3USH1 Gm18766-201ENSMUST00000189811 808 ntBASIC15.39■□□□□ 0.05
Fam196aQ3USH1 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.39■□□□□ 0.05
Fam196aQ3USH1 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.39■□□□□ 0.05
Fam196aQ3USH1 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Fam196aQ3USH1 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.39■□□□□ 0.05
Fam196aQ3USH1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Fam196aQ3USH1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Fam196aQ3USH1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Fam196aQ3USH1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Fam196aQ3USH1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Fam196aQ3USH1 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.39■□□□□ 0.05
Fam196aQ3USH1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Gm12091-201ENSMUST00000146791 830 ntBASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Fam196aQ3USH1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Gm16026-204ENSMUST00000162652 683 ntBASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Gm18018-201ENSMUST00000198273 408 ntBASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Gm43630-201ENSMUST00000201550 776 ntBASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Gm9908-201ENSMUST00000211534 448 ntBASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Fam196aQ3USH1 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Gm15483-201ENSMUST00000120338 456 ntBASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.36■□□□□ 0.05
Fam196aQ3USH1 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms