Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Gm46209-201ENSMUST00000217912 553 ntBASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Spg11Q3UHA3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Gm23931-201ENSMUST00000103842 109 ntBASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Gm7584-201ENSMUST00000175829 940 ntBASIC14.04□□□□□ -0.16
Spg11Q3UHA3 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.04□□□□□ -0.16
Spg11Q3UHA3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Gm18054-201ENSMUST00000207539 555 ntBASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Spg11Q3UHA3 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.03□□□□□ -0.16
Spg11Q3UHA3 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Haglr-201ENSMUST00000100000 2085 ntBASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Gm10766-202ENSMUST00000194123 606 ntBASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Gm37714-201ENSMUST00000194742 342 ntBASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Spg11Q3UHA3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spg11Q3UHA3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spg11Q3UHA3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spg11Q3UHA3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Spg11Q3UHA3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spg11Q3UHA3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spg11Q3UHA3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spg11Q3UHA3 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Spg11Q3UHA3 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Spg11Q3UHA3 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.02□□□□□ -0.16
Spg11Q3UHA3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Spg11Q3UHA3 Gm6244-201ENSMUST00000178732 841 ntBASIC14.02□□□□□ -0.16
Spg11Q3UHA3 Mir8109-201ENSMUST00000184375 117 ntBASIC14.02□□□□□ -0.16
Spg11Q3UHA3 Gm4857-201ENSMUST00000192718 785 ntBASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms