Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.51□□□□□ -0.09
Brf2Q3UAW9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Brf2Q3UAW9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Brf2Q3UAW9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Brf2Q3UAW9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Brf2Q3UAW9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.51□□□□□ -0.09
Brf2Q3UAW9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Brf2Q3UAW9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Brf2Q3UAW9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Brf2Q3UAW9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Brf2Q3UAW9 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Brf2Q3UAW9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Brf2Q3UAW9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Gm21362-201ENSMUST00000194272 928 ntBASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Brf2Q3UAW9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Brf2Q3UAW9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms