Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm45384-201ENSMUST00000210451 277 ntBASIC18.07■□□□□ 0.48
Col5a2Q3U962 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Gm9899-201ENSMUST00000065519 555 ntBASIC18.07■□□□□ 0.48
Col5a2Q3U962 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Col5a2Q3U962 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.07■□□□□ 0.48
Col5a2Q3U962 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Shd-206ENSMUST00000225145 998 ntBASIC18.07■□□□□ 0.48
Col5a2Q3U962 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.07■□□□□ 0.48
Col5a2Q3U962 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col5a2Q3U962 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col5a2Q3U962 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col5a2Q3U962 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col5a2Q3U962 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col5a2Q3U962 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col5a2Q3U962 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col5a2Q3U962 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col5a2Q3U962 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col5a2Q3U962 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col5a2Q3U962 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col5a2Q3U962 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col5a2Q3U962 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col5a2Q3U962 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col5a2Q3U962 Gm45195-201ENSMUST00000205597 1008 ntBASIC18.06■□□□□ 0.48
Col5a2Q3U962 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.06■□□□□ 0.48
Col5a2Q3U962 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.06■□□□□ 0.48
Col5a2Q3U962 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col5a2Q3U962 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col5a2Q3U962 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col5a2Q3U962 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col5a2Q3U962 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col5a2Q3U962 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col5a2Q3U962 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Col5a2Q3U962 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Col5a2Q3U962 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.05■□□□□ 0.48
Col5a2Q3U962 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.05■□□□□ 0.48
Col5a2Q3U962 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col5a2Q3U962 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC18.05■□□□□ 0.48
Col5a2Q3U962 Gm18018-201ENSMUST00000198273 408 ntBASIC18.05■□□□□ 0.48
Col5a2Q3U962 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col5a2Q3U962 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.05■□□□□ 0.48
Col5a2Q3U962 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col5a2Q3U962 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC18.05■□□□□ 0.48
Col5a2Q3U962 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col5a2Q3U962 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Col5a2Q3U962 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col5a2Q3U962 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col5a2Q3U962 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col5a2Q3U962 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col5a2Q3U962 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Col5a2Q3U962 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col5a2Q3U962 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col5a2Q3U962 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col5a2Q3U962 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col5a2Q3U962 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Col5a2Q3U962 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.04■□□□□ 0.48
Col5a2Q3U962 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col5a2Q3U962 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col5a2Q3U962 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col5a2Q3U962 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Col5a2Q3U962 Gm5320-201ENSMUST00000207163 1519 ntBASIC18.04■□□□□ 0.48
Col5a2Q3U962 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col5a2Q3U962 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col5a2Q3U962 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col5a2Q3U962 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col5a2Q3U962 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC18.04■□□□□ 0.48
Col5a2Q3U962 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col5a2Q3U962 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col5a2Q3U962 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.03■□□□□ 0.48
Col5a2Q3U962 Gm18062-201ENSMUST00000208020 547 ntBASIC18.03■□□□□ 0.48
Col5a2Q3U962 Gm18055-201ENSMUST00000208254 547 ntBASIC18.03■□□□□ 0.48
Col5a2Q3U962 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.03■□□□□ 0.48
Col5a2Q3U962 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col5a2Q3U962 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col5a2Q3U962 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col5a2Q3U962 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col5a2Q3U962 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col5a2Q3U962 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col5a2Q3U962 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.03■□□□□ 0.48
Col5a2Q3U962 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Col5a2Q3U962 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col5a2Q3U962 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.03■□□□□ 0.48
Col5a2Q3U962 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms