Protein–RNA interactions for Protein: Q3TVA9

Ccdc136, Coiled-coil domain-containing protein 136, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc136Q3TVA9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC26.7■■□□□ 1.87
Ccdc136Q3TVA9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
Ccdc136Q3TVA9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
Ccdc136Q3TVA9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Ccdc136Q3TVA9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Ccdc136Q3TVA9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC26.7■■□□□ 1.87
Ccdc136Q3TVA9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Ccdc136Q3TVA9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ccdc136Q3TVA9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ccdc136Q3TVA9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC26.7■■□□□ 1.86
Ccdc136Q3TVA9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC26.7■■□□□ 1.86
Ccdc136Q3TVA9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ccdc136Q3TVA9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Ccdc136Q3TVA9 Gm7774-201ENSMUST00000200064 533 ntBASIC26.7■■□□□ 1.86
Ccdc136Q3TVA9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Ccdc136Q3TVA9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ccdc136Q3TVA9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ccdc136Q3TVA9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
Ccdc136Q3TVA9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ccdc136Q3TVA9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ccdc136Q3TVA9 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm22065-201ENSMUST00000103753 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm22066-201ENSMUST00000103761 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm24932-201ENSMUST00000103763 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm24115-201ENSMUST00000103799 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm22190-201ENSMUST00000103827 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm22191-201ENSMUST00000103831 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm24721-201ENSMUST00000103849 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm28018-201ENSMUST00000103869 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm26399-201ENSMUST00000103937 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm25349-201ENSMUST00000177728 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm23616-201ENSMUST00000177797 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm25871-201ENSMUST00000177816 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm24752-201ENSMUST00000178240 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm24496-201ENSMUST00000178287 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm25649-201ENSMUST00000178476 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm25548-201ENSMUST00000178681 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm23147-201ENSMUST00000178841 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm26095-201ENSMUST00000179270 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm22171-201ENSMUST00000179283 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm23936-201ENSMUST00000179354 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm22619-201ENSMUST00000179516 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm25255-201ENSMUST00000179579 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm24755-201ENSMUST00000179691 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm26506-201ENSMUST00000179692 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm25086-201ENSMUST00000179931 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm23243-201ENSMUST00000180047 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm24659-201ENSMUST00000180212 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm24169-201ENSMUST00000180244 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm23689-201ENSMUST00000180354 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm27359-201ENSMUST00000184153 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm27785-201ENSMUST00000184268 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm27466-201ENSMUST00000184396 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm27703-201ENSMUST00000184836 110 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 AC166341.4-201ENSMUST00000220625 123 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 AC124732.2-201ENSMUST00000221977 316 ntBASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC26.69■■□□□ 1.86
Ccdc136Q3TVA9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ccdc136Q3TVA9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ccdc136Q3TVA9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
Ccdc136Q3TVA9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ccdc136Q3TVA9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ccdc136Q3TVA9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ccdc136Q3TVA9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ccdc136Q3TVA9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC26.68■■□□□ 1.86
Ccdc136Q3TVA9 Gm6973-201ENSMUST00000117080 721 ntBASIC26.68■■□□□ 1.86
Ccdc136Q3TVA9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC26.68■■□□□ 1.86
Ccdc136Q3TVA9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC26.68■■□□□ 1.86
Ccdc136Q3TVA9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ccdc136Q3TVA9 Gm5779-201ENSMUST00000218467 910 ntBASIC26.68■■□□□ 1.86
Ccdc136Q3TVA9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
Ccdc136Q3TVA9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
Ccdc136Q3TVA9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ccdc136Q3TVA9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
Ccdc136Q3TVA9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC26.67■■□□□ 1.86
Ccdc136Q3TVA9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ccdc136Q3TVA9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ccdc136Q3TVA9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ccdc136Q3TVA9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ccdc136Q3TVA9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC26.67■■□□□ 1.86
Ccdc136Q3TVA9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC26.67■■□□□ 1.86
Ccdc136Q3TVA9 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Ccdc136Q3TVA9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Ccdc136Q3TVA9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Ccdc136Q3TVA9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ccdc136Q3TVA9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms