Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Sybu-209ENSMUST00000228639 4113 ntBASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Khdc4Q3TCX3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Khdc4Q3TCX3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Gm8825-201ENSMUST00000182565 998 ntBASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Gm4518-201ENSMUST00000182638 718 ntBASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Mir6404-201ENSMUST00000183699 94 ntBASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Khdc4Q3TCX3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Khdc4Q3TCX3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Khdc4Q3TCX3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Khdc4Q3TCX3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Khdc4Q3TCX3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Khdc4Q3TCX3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Khdc4Q3TCX3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Khdc4Q3TCX3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Khdc4Q3TCX3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Khdc4Q3TCX3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Khdc4Q3TCX3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Khdc4Q3TCX3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Khdc4Q3TCX3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.62□□□□□ -0.07
Khdc4Q3TCX3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Khdc4Q3TCX3 Gm27397-201ENSMUST00000184997 107 ntBASIC14.62□□□□□ -0.07
Khdc4Q3TCX3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.62□□□□□ -0.07
Khdc4Q3TCX3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms