Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cul4aQ3TCH7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Cul4aQ3TCH7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cul4aQ3TCH7 Gm8344-201ENSMUST00000119813 856 ntBASIC16.17■□□□□ 0.18
Cul4aQ3TCH7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.17■□□□□ 0.18
Cul4aQ3TCH7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.17■□□□□ 0.18
Cul4aQ3TCH7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.17■□□□□ 0.18
Cul4aQ3TCH7 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.17■□□□□ 0.18
Cul4aQ3TCH7 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cul4aQ3TCH7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.17■□□□□ 0.18
Cul4aQ3TCH7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cul4aQ3TCH7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cul4aQ3TCH7 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cul4aQ3TCH7 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.17■□□□□ 0.18
Cul4aQ3TCH7 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.17■□□□□ 0.18
Cul4aQ3TCH7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cul4aQ3TCH7 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cul4aQ3TCH7 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cul4aQ3TCH7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cul4aQ3TCH7 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.17■□□□□ 0.18
Cul4aQ3TCH7 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Gm12497-201ENSMUST00000138778 237 ntBASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cul4aQ3TCH7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Gm4459-201ENSMUST00000118750 468 ntBASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cul4aQ3TCH7 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cul4aQ3TCH7 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Cul4aQ3TCH7 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cul4aQ3TCH7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cul4aQ3TCH7 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cul4aQ3TCH7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cul4aQ3TCH7 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.14■□□□□ 0.17
Cul4aQ3TCH7 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cul4aQ3TCH7 Gm15372-201ENSMUST00000120729 834 ntBASIC16.14■□□□□ 0.17
Cul4aQ3TCH7 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.14■□□□□ 0.17
Cul4aQ3TCH7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cul4aQ3TCH7 Gm27867-201ENSMUST00000184778 125 ntBASIC16.14■□□□□ 0.17
Cul4aQ3TCH7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cul4aQ3TCH7 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.14■□□□□ 0.17
Cul4aQ3TCH7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms