Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q3KNL4 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q3KNL4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q3KNL4 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q3KNL4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q3KNL4 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Q3KNL4 Gm6659-201ENSMUST00000174752 547 ntBASIC15.14■□□□□ 0.01
Q3KNL4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Q3KNL4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.14■□□□□ 0.01
Q3KNL4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.14■□□□□ 0.01
Q3KNL4 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.14■□□□□ 0.01
Q3KNL4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q3KNL4 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q3KNL4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Q3KNL4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Q3KNL4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q3KNL4 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Q3KNL4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q3KNL4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q3KNL4 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q3KNL4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q3KNL4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q3KNL4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q3KNL4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Q3KNL4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.13■□□□□ 0.01
Q3KNL4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q3KNL4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q3KNL4 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q3KNL4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q3KNL4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Q3KNL4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Q3KNL4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Q3KNL4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Q3KNL4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Q3KNL4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Q3KNL4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.13■□□□□ 0.01
Q3KNL4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q3KNL4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q3KNL4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Q3KNL4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q3KNL4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Q3KNL4 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Q3KNL4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Q3KNL4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Q3KNL4 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q3KNL4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q3KNL4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q3KNL4 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Q3KNL4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q3KNL4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q3KNL4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q3KNL4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Q3KNL4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Q3KNL4 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Q3KNL4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.12■□□□□ 0.01
Q3KNL4 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q3KNL4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q3KNL4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Q3KNL4 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q3KNL4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q3KNL4 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.12■□□□□ 0.01
Q3KNL4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Q3KNL4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Q3KNL4 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.12■□□□□ 0.01
Q3KNL4 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.12■□□□□ 0.01
Q3KNL4 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.12■□□□□ 0.01
Q3KNL4 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.12■□□□□ 0.01
Q3KNL4 Gm13836-201ENSMUST00000121159 501 ntBASIC15.12■□□□□ 0.01
Q3KNL4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.12■□□□□ 0.01
Q3KNL4 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.12■□□□□ 0.01
Q3KNL4 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.12■□□□□ 0.01
Q3KNL4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.12■□□□□ 0.01
Q3KNL4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.12■□□□□ 0.01
Q3KNL4 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.12■□□□□ 0.01
Q3KNL4 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.12■□□□□ 0.01
Q3KNL4 Gm8825-201ENSMUST00000182565 998 ntBASIC15.12■□□□□ 0.01
Q3KNL4 Gm4518-201ENSMUST00000182638 718 ntBASIC15.12■□□□□ 0.01
Q3KNL4 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.12■□□□□ 0.01
Q3KNL4 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.12■□□□□ 0.01
Q3KNL4 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.12■□□□□ 0.01
Q3KNL4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Q3KNL4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.12■□□□□ 0.01
Q3KNL4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q3KNL4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q3KNL4 Gm7367-201ENSMUST00000057611 492 ntBASIC15.12■□□□□ 0.01
Q3KNL4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Q3KNL4 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.12■□□□□ 0.01
Q3KNL4 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.12■□□□□ 0.01
Q3KNL4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.12■□□□□ 0.01
Q3KNL4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q3KNL4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q3KNL4 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Q3KNL4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Q3KNL4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q3KNL4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q3KNL4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Q3KNL4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q3KNL4 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q3KNL4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Q3KNL4 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms