Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Gm12957-201ENSMUST00000117835 377 ntBASIC19.22■□□□□ 0.67
Cacna1sQ02789 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC19.22■□□□□ 0.67
Cacna1sQ02789 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1sQ02789 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1sQ02789 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1sQ02789 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1sQ02789 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.21■□□□□ 0.67
Cacna1sQ02789 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1sQ02789 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.21■□□□□ 0.67
Cacna1sQ02789 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC19.21■□□□□ 0.67
Cacna1sQ02789 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Cacna1sQ02789 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1sQ02789 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1sQ02789 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1sQ02789 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.66
Cacna1sQ02789 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
Cacna1sQ02789 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Cacna1sQ02789 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Gm8062-201ENSMUST00000139696 444 ntBASIC19.2■□□□□ 0.66
Cacna1sQ02789 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.2■□□□□ 0.66
Cacna1sQ02789 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Gm13392-201ENSMUST00000117708 150 ntBASIC19.2■□□□□ 0.66
Cacna1sQ02789 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Cacna1sQ02789 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Gm19220-201ENSMUST00000222682 803 ntBASIC19.2■□□□□ 0.66
Cacna1sQ02789 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Cacna1sQ02789 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1sQ02789 Gm9200-201ENSMUST00000118513 1354 ntBASIC19.19■□□□□ 0.66
Cacna1sQ02789 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1sQ02789 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Cacna1sQ02789 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1sQ02789 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1sQ02789 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1sQ02789 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC19.19■□□□□ 0.66
Cacna1sQ02789 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1sQ02789 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1sQ02789 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1sQ02789 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.19■□□□□ 0.66
Cacna1sQ02789 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.19■□□□□ 0.66
Cacna1sQ02789 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cacna1sQ02789 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC19.18■□□□□ 0.66
Cacna1sQ02789 Gm12390-201ENSMUST00000117897 397 ntBASIC19.18■□□□□ 0.66
Cacna1sQ02789 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Cacna1sQ02789 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC19.18■□□□□ 0.66
Cacna1sQ02789 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC19.18■□□□□ 0.66
Cacna1sQ02789 Gm45453-201ENSMUST00000211758 853 ntBASIC19.18■□□□□ 0.66
Cacna1sQ02789 AC155252.1-201ENSMUST00000226462 1208 ntBASIC19.18■□□□□ 0.66
Cacna1sQ02789 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1sQ02789 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1sQ02789 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC19.18■□□□□ 0.66
Cacna1sQ02789 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1sQ02789 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1sQ02789 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1sQ02789 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1sQ02789 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1sQ02789 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1sQ02789 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1sQ02789 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1sQ02789 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Cacna1sQ02789 Gm13226-201ENSMUST00000117838 404 ntBASIC19.18■□□□□ 0.66
Cacna1sQ02789 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1sQ02789 Gm7067-201ENSMUST00000207698 1249 ntBASIC19.18■□□□□ 0.66
Cacna1sQ02789 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1sQ02789 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1sQ02789 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Cacna1sQ02789 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1sQ02789 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC19.17■□□□□ 0.66
Cacna1sQ02789 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Cacna1sQ02789 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cacna1sQ02789 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1sQ02789 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1sQ02789 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC19.17■□□□□ 0.66
Cacna1sQ02789 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1sQ02789 Snora78-201ENSMUST00000158630 128 ntBASIC19.17■□□□□ 0.66
Cacna1sQ02789 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC19.17■□□□□ 0.66
Cacna1sQ02789 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1sQ02789 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1sQ02789 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1sQ02789 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1sQ02789 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1sQ02789 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms