Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.9■□□□□ 0.14
IhhP97812 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.9■□□□□ 0.14
IhhP97812 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
IhhP97812 Gm9385-201ENSMUST00000117563 472 ntBASIC15.9■□□□□ 0.14
IhhP97812 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.9■□□□□ 0.14
IhhP97812 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IhhP97812 Gm20553-201ENSMUST00000204205 844 ntBASIC15.9■□□□□ 0.14
IhhP97812 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.9■□□□□ 0.14
IhhP97812 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IhhP97812 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IhhP97812 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IhhP97812 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IhhP97812 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
IhhP97812 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
IhhP97812 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
IhhP97812 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
IhhP97812 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
IhhP97812 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IhhP97812 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.89■□□□□ 0.13
IhhP97812 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IhhP97812 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.89■□□□□ 0.13
IhhP97812 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
IhhP97812 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.89■□□□□ 0.13
IhhP97812 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IhhP97812 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IhhP97812 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IhhP97812 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
IhhP97812 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.89■□□□□ 0.13
IhhP97812 Gm12008-201ENSMUST00000117791 755 ntBASIC15.89■□□□□ 0.13
IhhP97812 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.89■□□□□ 0.13
IhhP97812 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
IhhP97812 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.89■□□□□ 0.13
IhhP97812 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.89■□□□□ 0.13
IhhP97812 Gm37935-201ENSMUST00000192012 982 ntBASIC15.89■□□□□ 0.13
IhhP97812 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.89■□□□□ 0.13
IhhP97812 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.89■□□□□ 0.13
IhhP97812 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
IhhP97812 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.89■□□□□ 0.13
IhhP97812 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
IhhP97812 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IhhP97812 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
IhhP97812 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
IhhP97812 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
IhhP97812 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IhhP97812 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.89■□□□□ 0.13
IhhP97812 Asic1-205ENSMUST00000228185 1818 ntBASIC15.89■□□□□ 0.13
IhhP97812 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
IhhP97812 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
IhhP97812 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IhhP97812 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
IhhP97812 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
IhhP97812 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IhhP97812 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
IhhP97812 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IhhP97812 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.88■□□□□ 0.13
IhhP97812 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IhhP97812 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IhhP97812 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.88■□□□□ 0.13
IhhP97812 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IhhP97812 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IhhP97812 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IhhP97812 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.88■□□□□ 0.13
IhhP97812 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
IhhP97812 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
IhhP97812 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IhhP97812 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.87■□□□□ 0.13
IhhP97812 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IhhP97812 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.87■□□□□ 0.13
IhhP97812 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.87■□□□□ 0.13
IhhP97812 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.87■□□□□ 0.13
IhhP97812 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IhhP97812 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
IhhP97812 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
IhhP97812 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.87■□□□□ 0.13
IhhP97812 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.87■□□□□ 0.13
IhhP97812 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
IhhP97812 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.87■□□□□ 0.13
IhhP97812 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.87■□□□□ 0.13
IhhP97812 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
IhhP97812 Thap2-203ENSMUST00000218989 527 ntBASIC15.87■□□□□ 0.13
IhhP97812 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IhhP97812 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
IhhP97812 Celf4-206ENSMUST00000224553 1729 ntBASIC15.87■□□□□ 0.13
IhhP97812 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
IhhP97812 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
IhhP97812 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
IhhP97812 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
IhhP97812 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
IhhP97812 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
IhhP97812 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IhhP97812 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
IhhP97812 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IhhP97812 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IhhP97812 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
IhhP97812 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IhhP97812 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IhhP97812 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
IhhP97812 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
IhhP97812 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.86■□□□□ 0.13
IhhP97812 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms