Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Gm5264-201ENSMUST00000190584 848 ntBASIC14.54□□□□□ -0.08
Nkx3-2P97503 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.54□□□□□ -0.08
Nkx3-2P97503 Gm19164-201ENSMUST00000210667 640 ntBASIC14.54□□□□□ -0.08
Nkx3-2P97503 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.54□□□□□ -0.08
Nkx3-2P97503 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.54□□□□□ -0.08
Nkx3-2P97503 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.54□□□□□ -0.08
Nkx3-2P97503 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.54□□□□□ -0.08
Nkx3-2P97503 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.53□□□□□ -0.08
Nkx3-2P97503 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.53□□□□□ -0.08
Nkx3-2P97503 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.53□□□□□ -0.08
Nkx3-2P97503 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Gm37153-201ENSMUST00000193637 231 ntBASIC14.53□□□□□ -0.08
Nkx3-2P97503 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.53□□□□□ -0.08
Nkx3-2P97503 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx3-2P97503 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.52□□□□□ -0.08
Nkx3-2P97503 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx3-2P97503 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.52□□□□□ -0.08
Nkx3-2P97503 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx3-2P97503 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.52□□□□□ -0.08
Nkx3-2P97503 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Nkx3-2P97503 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx3-2P97503 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx3-2P97503 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx3-2P97503 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Nkx3-2P97503 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx3-2P97503 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx3-2P97503 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx3-2P97503 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx3-2P97503 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx3-2P97503 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx3-2P97503 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx3-2P97503 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx3-2P97503 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx3-2P97503 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx3-2P97503 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.52□□□□□ -0.08
Nkx3-2P97503 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx3-2P97503 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx3-2P97503 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx3-2P97503 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.52□□□□□ -0.09
Nkx3-2P97503 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.52□□□□□ -0.09
Nkx3-2P97503 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx3-2P97503 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx3-2P97503 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.52□□□□□ -0.09
Nkx3-2P97503 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx3-2P97503 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Nkx3-2P97503 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Nkx3-2P97503 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.52□□□□□ -0.09
Nkx3-2P97503 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx3-2P97503 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx3-2P97503 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.52□□□□□ -0.09
Nkx3-2P97503 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx3-2P97503 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx3-2P97503 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx3-2P97503 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Nkx3-2P97503 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx3-2P97503 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx3-2P97503 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx3-2P97503 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms