Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc1P97496 Gm13216-201ENSMUST00000117145 591 ntBASIC19.19■□□□□ 0.66
Smarcc1P97496 Gm13453-201ENSMUST00000118708 357 ntBASIC19.19■□□□□ 0.66
Smarcc1P97496 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC19.19■□□□□ 0.66
Smarcc1P97496 Gm38225-201ENSMUST00000194001 393 ntBASIC19.19■□□□□ 0.66
Smarcc1P97496 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc1P97496 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Smarcc1P97496 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc1P97496 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc1P97496 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc1P97496 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc1P97496 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc1P97496 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc1P97496 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Smarcc1P97496 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc1P97496 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smarcc1P97496 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc1P97496 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc1P97496 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.18■□□□□ 0.66
Smarcc1P97496 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc1P97496 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Smarcc1P97496 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc1P97496 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc1P97496 Gm6888-201ENSMUST00000221983 706 ntBASIC19.18■□□□□ 0.66
Smarcc1P97496 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC19.18■□□□□ 0.66
Smarcc1P97496 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc1P97496 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc1P97496 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc1P97496 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc1P97496 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc1P97496 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc1P97496 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smarcc1P97496 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Smarcc1P97496 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.17■□□□□ 0.66
Smarcc1P97496 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc1P97496 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc1P97496 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Smarcc1P97496 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC19.17■□□□□ 0.66
Smarcc1P97496 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc1P97496 Mir7684-201ENSMUST00000183858 60 ntBASIC19.17■□□□□ 0.66
Smarcc1P97496 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc1P97496 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc1P97496 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC19.17■□□□□ 0.66
Smarcc1P97496 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc1P97496 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smarcc1P97496 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc1P97496 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc1P97496 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc1P97496 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc1P97496 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.17■□□□□ 0.66
Smarcc1P97496 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc1P97496 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc1P97496 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc1P97496 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Smarcc1P97496 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcc1P97496 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Smarcc1P97496 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.16■□□□□ 0.66
Smarcc1P97496 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc1P97496 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc1P97496 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc1P97496 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc1P97496 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc1P97496 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc1P97496 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc1P97496 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc1P97496 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Smarcc1P97496 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC19.16■□□□□ 0.66
Smarcc1P97496 Gm16026-204ENSMUST00000162652 683 ntBASIC19.16■□□□□ 0.66
Smarcc1P97496 Gtpbp10-211ENSMUST00000198799 648 ntBASIC19.16■□□□□ 0.66
Smarcc1P97496 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc1P97496 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Smarcc1P97496 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc1P97496 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc1P97496 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcc1P97496 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Smarcc1P97496 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.16■□□□□ 0.66
Smarcc1P97496 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc1P97496 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc1P97496 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc1P97496 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc1P97496 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc1P97496 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Smarcc1P97496 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc1P97496 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc1P97496 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Smarcc1P97496 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC19.15■□□□□ 0.66
Smarcc1P97496 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC19.15■□□□□ 0.66
Smarcc1P97496 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Smarcc1P97496 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc1P97496 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc1P97496 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc1P97496 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc1P97496 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.15■□□□□ 0.66
Smarcc1P97496 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC19.15■□□□□ 0.66
Smarcc1P97496 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Smarcc1P97496 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcc1P97496 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.14■□□□□ 0.66
Smarcc1P97496 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smarcc1P97496 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Smarcc1P97496 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms