Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.71■□□□□ 0.27
Trim43cP86449 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim43cP86449 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim43cP86449 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim43cP86449 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim43cP86449 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim43cP86449 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim43cP86449 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trim43cP86449 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim43cP86449 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim43cP86449 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.71■□□□□ 0.26
Trim43cP86449 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Trim43cP86449 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim43cP86449 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim43cP86449 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.7■□□□□ 0.26
Trim43cP86449 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim43cP86449 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim43cP86449 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim43cP86449 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim43cP86449 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim43cP86449 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trim43cP86449 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Trim43cP86449 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim43cP86449 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Trim43cP86449 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim43cP86449 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim43cP86449 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim43cP86449 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim43cP86449 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.7■□□□□ 0.26
Trim43cP86449 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.7■□□□□ 0.26
Trim43cP86449 Gm37153-201ENSMUST00000193637 231 ntBASIC16.7■□□□□ 0.26
Trim43cP86449 Gm9682-201ENSMUST00000197505 556 ntBASIC16.7■□□□□ 0.26
Trim43cP86449 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim43cP86449 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim43cP86449 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Trim43cP86449 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim43cP86449 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim43cP86449 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim43cP86449 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim43cP86449 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim43cP86449 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43cP86449 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.69■□□□□ 0.26
Trim43cP86449 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim43cP86449 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trim43cP86449 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43cP86449 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43cP86449 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim43cP86449 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43cP86449 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43cP86449 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43cP86449 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trim43cP86449 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Trim43cP86449 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43cP86449 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43cP86449 Gm7222-201ENSMUST00000117512 906 ntBASIC16.69■□□□□ 0.26
Trim43cP86449 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim43cP86449 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.69■□□□□ 0.26
Trim43cP86449 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.69■□□□□ 0.26
Trim43cP86449 Gm28659-201ENSMUST00000188013 759 ntBASIC16.69■□□□□ 0.26
Trim43cP86449 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
Trim43cP86449 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43cP86449 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43cP86449 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43cP86449 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43cP86449 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43cP86449 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43cP86449 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.69■□□□□ 0.26
Trim43cP86449 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43cP86449 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43cP86449 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.69■□□□□ 0.26
Trim43cP86449 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43cP86449 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43cP86449 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43cP86449 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43cP86449 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43cP86449 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Trim43cP86449 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim43cP86449 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43cP86449 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trim43cP86449 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43cP86449 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43cP86449 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim43cP86449 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43cP86449 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43cP86449 Gm15173-201ENSMUST00000122049 433 ntBASIC16.68■□□□□ 0.26
Trim43cP86449 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Trim43cP86449 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43cP86449 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.68■□□□□ 0.26
Trim43cP86449 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43cP86449 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43cP86449 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43cP86449 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43cP86449 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43cP86449 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43cP86449 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43cP86449 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43cP86449 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim43cP86449 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43cP86449 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43cP86449 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms