Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Otx1P80205 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Otx1P80205 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Otx1P80205 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.24□□□□□ -0.29
Otx1P80205 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Otx1P80205 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Otx1P80205 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Otx1P80205 Gm8318-201ENSMUST00000182954 872 ntBASIC13.24□□□□□ -0.29
Otx1P80205 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.24□□□□□ -0.29
Otx1P80205 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.24□□□□□ -0.29
Otx1P80205 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Otx1P80205 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Otx1P80205 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Otx1P80205 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Otx1P80205 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Otx1P80205 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Otx1P80205 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Otx1P80205 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Otx1P80205 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Otx1P80205 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.24□□□□□ -0.29
Otx1P80205 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Otx1P80205 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Otx1P80205 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Otx1P80205 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Otx1P80205 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Otx1P80205 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Otx1P80205 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Otx1P80205 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Otx1P80205 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Otx1P80205 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.23□□□□□ -0.29
Otx1P80205 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Otx1P80205 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Otx1P80205 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Otx1P80205 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Otx1P80205 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Otx1P80205 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Otx1P80205 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Otx1P80205 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.23□□□□□ -0.29
Otx1P80205 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Otx1P80205 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Otx1P80205 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Otx1P80205 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Otx1P80205 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.23□□□□□ -0.29
Otx1P80205 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Otx1P80205 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Otx1P80205 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Otx1P80205 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Otx1P80205 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Otx1P80205 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Otx1P80205 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Otx1P80205 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Otx1P80205 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Otx1P80205 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
Otx1P80205 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Otx1P80205 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otx1P80205 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Otx1P80205 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Otx1P80205 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otx1P80205 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otx1P80205 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.22□□□□□ -0.29
Otx1P80205 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Otx1P80205 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.22□□□□□ -0.29
Otx1P80205 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.22□□□□□ -0.29
Otx1P80205 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otx1P80205 BC037039-201ENSMUST00000192003 2205 ntBASIC13.22□□□□□ -0.29
Otx1P80205 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Otx1P80205 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.22□□□□□ -0.29
Otx1P80205 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otx1P80205 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otx1P80205 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Otx1P80205 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Otx1P80205 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Otx1P80205 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otx1P80205 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Otx1P80205 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otx1P80205 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.22□□□□□ -0.29
Otx1P80205 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.22□□□□□ -0.29
Otx1P80205 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otx1P80205 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.22□□□□□ -0.29
Otx1P80205 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otx1P80205 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Otx1P80205 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.22□□□□□ -0.29
Otx1P80205 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Otx1P80205 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otx1P80205 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Otx1P80205 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otx1P80205 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otx1P80205 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Otx1P80205 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.21□□□□□ -0.29
Otx1P80205 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otx1P80205 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otx1P80205 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otx1P80205 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otx1P80205 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Otx1P80205 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otx1P80205 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otx1P80205 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Otx1P80205 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Otx1P80205 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Otx1P80205 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms