Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shox2P70390 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shox2P70390 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Shox2P70390 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shox2P70390 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shox2P70390 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shox2P70390 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shox2P70390 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shox2P70390 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shox2P70390 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shox2P70390 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shox2P70390 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Shox2P70390 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shox2P70390 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.23■□□□□ 0.03
Shox2P70390 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shox2P70390 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shox2P70390 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shox2P70390 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Shox2P70390 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shox2P70390 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shox2P70390 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shox2P70390 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shox2P70390 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.23■□□□□ 0.03
Shox2P70390 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Shox2P70390 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shox2P70390 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.23■□□□□ 0.03
Shox2P70390 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.23■□□□□ 0.03
Shox2P70390 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shox2P70390 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shox2P70390 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shox2P70390 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shox2P70390 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shox2P70390 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shox2P70390 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shox2P70390 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shox2P70390 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.23■□□□□ 0.03
Shox2P70390 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shox2P70390 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.22■□□□□ 0.03
Shox2P70390 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 Gm5643-201ENSMUST00000117081 966 ntBASIC15.22■□□□□ 0.03
Shox2P70390 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Shox2P70390 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shox2P70390 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shox2P70390 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shox2P70390 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.21■□□□□ 0.03
Shox2P70390 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shox2P70390 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.21■□□□□ 0.03
Shox2P70390 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shox2P70390 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Shox2P70390 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.21■□□□□ 0.03
Shox2P70390 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Shox2P70390 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Shox2P70390 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Shox2P70390 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shox2P70390 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.21■□□□□ 0.03
Shox2P70390 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.21■□□□□ 0.03
Shox2P70390 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.21■□□□□ 0.03
Shox2P70390 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.21■□□□□ 0.03
Shox2P70390 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.21■□□□□ 0.03
Shox2P70390 Odf3b-204ENSMUST00000227834 930 ntBASIC15.21■□□□□ 0.03
Shox2P70390 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shox2P70390 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shox2P70390 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shox2P70390 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Shox2P70390 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Shox2P70390 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shox2P70390 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shox2P70390 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Shox2P70390 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shox2P70390 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Shox2P70390 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Shox2P70390 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shox2P70390 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shox2P70390 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shox2P70390 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
Shox2P70390 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shox2P70390 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shox2P70390 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shox2P70390 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shox2P70390 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms