Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msx3P70354 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Msx3P70354 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msx3P70354 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msx3P70354 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msx3P70354 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msx3P70354 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.82■□□□□ 0.12
Msx3P70354 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Msx3P70354 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msx3P70354 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msx3P70354 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msx3P70354 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msx3P70354 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msx3P70354 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msx3P70354 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msx3P70354 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Msx3P70354 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msx3P70354 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Msx3P70354 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msx3P70354 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msx3P70354 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msx3P70354 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Msx3P70354 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msx3P70354 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msx3P70354 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msx3P70354 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msx3P70354 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Msx3P70354 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msx3P70354 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Msx3P70354 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Msx3P70354 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msx3P70354 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Msx3P70354 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Msx3P70354 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msx3P70354 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.81■□□□□ 0.12
Msx3P70354 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Msx3P70354 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Msx3P70354 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.81■□□□□ 0.12
Msx3P70354 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msx3P70354 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msx3P70354 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Msx3P70354 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msx3P70354 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Msx3P70354 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Msx3P70354 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msx3P70354 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Msx3P70354 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msx3P70354 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msx3P70354 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.81■□□□□ 0.12
Msx3P70354 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Msx3P70354 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msx3P70354 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msx3P70354 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Msx3P70354 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msx3P70354 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msx3P70354 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msx3P70354 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msx3P70354 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.8■□□□□ 0.12
Msx3P70354 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Msx3P70354 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msx3P70354 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msx3P70354 Ank2-226ENSMUST00000189368 339 ntBASIC15.8■□□□□ 0.12
Msx3P70354 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msx3P70354 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.8■□□□□ 0.12
Msx3P70354 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.8■□□□□ 0.12
Msx3P70354 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msx3P70354 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msx3P70354 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msx3P70354 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.8■□□□□ 0.12
Msx3P70354 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msx3P70354 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msx3P70354 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msx3P70354 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msx3P70354 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msx3P70354 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msx3P70354 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msx3P70354 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msx3P70354 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Msx3P70354 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.79■□□□□ 0.12
Msx3P70354 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msx3P70354 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Msx3P70354 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.79■□□□□ 0.12
Msx3P70354 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Msx3P70354 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msx3P70354 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.79■□□□□ 0.12
Msx3P70354 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Msx3P70354 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Msx3P70354 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
Msx3P70354 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.79■□□□□ 0.12
Msx3P70354 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.79■□□□□ 0.12
Msx3P70354 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Msx3P70354 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Msx3P70354 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msx3P70354 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msx3P70354 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msx3P70354 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.79■□□□□ 0.12
Msx3P70354 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Msx3P70354 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msx3P70354 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Msx3P70354 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms