Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Crnkl1P63154 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Crnkl1P63154 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Crnkl1P63154 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.27■□□□□ 0.03
Crnkl1P63154 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.27■□□□□ 0.03
Crnkl1P63154 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Crnkl1P63154 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Crnkl1P63154 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Crnkl1P63154 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Crnkl1P63154 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Crnkl1P63154 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Crnkl1P63154 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Crnkl1P63154 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Crnkl1P63154 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Crnkl1P63154 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Crnkl1P63154 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Crnkl1P63154 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Crnkl1P63154 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Crnkl1P63154 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Crnkl1P63154 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Crnkl1P63154 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Crnkl1P63154 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Crnkl1P63154 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Crnkl1P63154 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Crnkl1P63154 Gm22697-201ENSMUST00000175194 63 ntBASIC15.26■□□□□ 0.03
Crnkl1P63154 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Crnkl1P63154 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.26■□□□□ 0.03
Crnkl1P63154 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Crnkl1P63154 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.26■□□□□ 0.03
Crnkl1P63154 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Crnkl1P63154 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Crnkl1P63154 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Crnkl1P63154 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Crnkl1P63154 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.26■□□□□ 0.03
Crnkl1P63154 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Crnkl1P63154 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Crnkl1P63154 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Crnkl1P63154 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Crnkl1P63154 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Crnkl1P63154 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Crnkl1P63154 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Crnkl1P63154 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Crnkl1P63154 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Crnkl1P63154 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Crnkl1P63154 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Crnkl1P63154 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Crnkl1P63154 Gm10013-201ENSMUST00000106074 672 ntBASIC15.25■□□□□ 0.03
Crnkl1P63154 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Crnkl1P63154 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Crnkl1P63154 Gm36967-201ENSMUST00000193814 266 ntBASIC15.25■□□□□ 0.03
Crnkl1P63154 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.25■□□□□ 0.03
Crnkl1P63154 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Crnkl1P63154 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Crnkl1P63154 Gm7213-201ENSMUST00000215977 950 ntBASIC15.25■□□□□ 0.03
Crnkl1P63154 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Crnkl1P63154 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Crnkl1P63154 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Crnkl1P63154 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Crnkl1P63154 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Crnkl1P63154 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Crnkl1P63154 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Crnkl1P63154 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Crnkl1P63154 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Crnkl1P63154 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Crnkl1P63154 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crnkl1P63154 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crnkl1P63154 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crnkl1P63154 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crnkl1P63154 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.24■□□□□ 0.03
Crnkl1P63154 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crnkl1P63154 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crnkl1P63154 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crnkl1P63154 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Crnkl1P63154 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.24■□□□□ 0.03
Crnkl1P63154 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crnkl1P63154 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crnkl1P63154 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crnkl1P63154 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crnkl1P63154 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.24■□□□□ 0.03
Crnkl1P63154 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crnkl1P63154 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crnkl1P63154 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crnkl1P63154 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crnkl1P63154 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Crnkl1P63154 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crnkl1P63154 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crnkl1P63154 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Crnkl1P63154 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crnkl1P63154 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Crnkl1P63154 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Crnkl1P63154 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Crnkl1P63154 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Crnkl1P63154 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crnkl1P63154 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crnkl1P63154 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crnkl1P63154 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Crnkl1P63154 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.23■□□□□ 0.03
Crnkl1P63154 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Crnkl1P63154 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Crnkl1P63154 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms