Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Rps28P62858 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rps28P62858 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC9.1□□□□□ -0.95
Rps28P62858 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rps28P62858 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Rps28P62858 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rps28P62858 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rps28P62858 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rps28P62858 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rps28P62858 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rps28P62858 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rps28P62858 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rps28P62858 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Rps28P62858 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rps28P62858 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC9.09□□□□□ -0.95
Rps28P62858 Reep4-203ENSMUST00000226563 1444 ntBASIC9.09□□□□□ -0.95
Rps28P62858 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC9.09□□□□□ -0.95
Rps28P62858 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rps28P62858 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.09□□□□□ -0.95
Rps28P62858 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rps28P62858 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rps28P62858 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rps28P62858 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rps28P62858 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rps28P62858 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Rps28P62858 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rps28P62858 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rps28P62858 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rps28P62858 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rps28P62858 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.96
Rps28P62858 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Rps28P62858 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Rps28P62858 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Rps28P62858 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
Rps28P62858 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Rps28P62858 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.08□□□□□ -0.96
Rps28P62858 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Rps28P62858 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Rps28P62858 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
Rps28P62858 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Rps28P62858 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Rps28P62858 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC9.08□□□□□ -0.96
Rps28P62858 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rps28P62858 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Rps28P62858 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC9.07□□□□□ -0.96
Rps28P62858 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
Rps28P62858 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Rps28P62858 Ssr1-204ENSMUST00000225319 1610 ntBASIC9.07□□□□□ -0.96
Rps28P62858 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
Rps28P62858 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Rps28P62858 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rps28P62858 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms