Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Lsm6P62313 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm6P62313 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm6P62313 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm6P62313 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Lsm6P62313 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.49□□□□□ -0.25
Lsm6P62313 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Lsm6P62313 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Lsm6P62313 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.49□□□□□ -0.25
Lsm6P62313 Gm11780-201ENSMUST00000136880 516 ntBASIC13.49□□□□□ -0.25
Lsm6P62313 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.49□□□□□ -0.25
Lsm6P62313 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.49□□□□□ -0.25
Lsm6P62313 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.49□□□□□ -0.25
Lsm6P62313 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Lsm6P62313 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Lsm6P62313 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 BC037039-201ENSMUST00000192003 2205 ntBASIC13.49□□□□□ -0.25
Lsm6P62313 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.49□□□□□ -0.25
Lsm6P62313 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Lsm6P62313 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm6P62313 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Lsm6P62313 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm6P62313 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm6P62313 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm6P62313 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Lsm6P62313 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm6P62313 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm6P62313 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm6P62313 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm6P62313 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.48□□□□□ -0.25
Lsm6P62313 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm6P62313 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.48□□□□□ -0.25
Lsm6P62313 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm6P62313 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.48□□□□□ -0.25
Lsm6P62313 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm6P62313 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm6P62313 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm6P62313 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm6P62313 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm6P62313 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm6P62313 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Lsm6P62313 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.48□□□□□ -0.25
Lsm6P62313 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Lsm6P62313 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm6P62313 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm6P62313 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm6P62313 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.48□□□□□ -0.25
Lsm6P62313 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Lsm6P62313 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm6P62313 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm6P62313 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.47□□□□□ -0.25
Lsm6P62313 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm6P62313 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm6P62313 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm6P62313 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm6P62313 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm6P62313 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm6P62313 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm6P62313 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm6P62313 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm6P62313 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.47□□□□□ -0.25
Lsm6P62313 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm6P62313 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Lsm6P62313 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.47□□□□□ -0.25
Lsm6P62313 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm6P62313 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Lsm6P62313 Gm43347-201ENSMUST00000200226 580 ntBASIC13.47□□□□□ -0.25
Lsm6P62313 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.47□□□□□ -0.25
Lsm6P62313 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.47□□□□□ -0.25
Lsm6P62313 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.47□□□□□ -0.25
Lsm6P62313 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.47□□□□□ -0.25
Lsm6P62313 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms