Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nup43P59235 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nup43P59235 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup43P59235 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup43P59235 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup43P59235 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup43P59235 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup43P59235 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup43P59235 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup43P59235 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup43P59235 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup43P59235 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup43P59235 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup43P59235 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup43P59235 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup43P59235 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.52□□□□□ -0.08
Nup43P59235 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nup43P59235 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup43P59235 Gm11764-201ENSMUST00000120221 623 ntBASIC14.52□□□□□ -0.09
Nup43P59235 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.52□□□□□ -0.09
Nup43P59235 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup43P59235 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nup43P59235 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup43P59235 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.52□□□□□ -0.09
Nup43P59235 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup43P59235 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.52□□□□□ -0.09
Nup43P59235 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.52□□□□□ -0.09
Nup43P59235 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup43P59235 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup43P59235 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup43P59235 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Nup43P59235 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nup43P59235 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.52□□□□□ -0.09
Nup43P59235 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup43P59235 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nup43P59235 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nup43P59235 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup43P59235 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup43P59235 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup43P59235 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Nup43P59235 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.51□□□□□ -0.09
Nup43P59235 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
Nup43P59235 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Nup43P59235 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Nup43P59235 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.51□□□□□ -0.09
Nup43P59235 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.51□□□□□ -0.09
Nup43P59235 Gm18489-201ENSMUST00000172565 551 ntBASIC14.51□□□□□ -0.09
Nup43P59235 Mir5126-201ENSMUST00000175513 77 ntBASIC14.51□□□□□ -0.09
Nup43P59235 Gm8318-201ENSMUST00000182954 872 ntBASIC14.51□□□□□ -0.09
Nup43P59235 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.51□□□□□ -0.09
Nup43P59235 Gm15590-201ENSMUST00000078419 552 ntBASIC14.51□□□□□ -0.09
Nup43P59235 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Nup43P59235 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Nup43P59235 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup43P59235 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.51□□□□□ -0.09
Nup43P59235 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nup43P59235 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Nup43P59235 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nup43P59235 Gm13036-201ENSMUST00000117799 748 ntBASIC14.5□□□□□ -0.09
Nup43P59235 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.5□□□□□ -0.09
Nup43P59235 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.5□□□□□ -0.09
Nup43P59235 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nup43P59235 Gm44487-201ENSMUST00000205145 325 ntBASIC14.5□□□□□ -0.09
Nup43P59235 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms