Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ctdsp1P58466 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.06□□□□□ -0.48
Ctdsp1P58466 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Gm27454-201ENSMUST00000185090 204 ntBASIC12.06□□□□□ -0.48
Ctdsp1P58466 Appbp2os-202ENSMUST00000206972 447 ntBASIC12.06□□□□□ -0.48
Ctdsp1P58466 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ctdsp1P58466 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdsp1P58466 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.05□□□□□ -0.48
Ctdsp1P58466 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdsp1P58466 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdsp1P58466 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.04□□□□□ -0.48
Ctdsp1P58466 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.04□□□□□ -0.48
Ctdsp1P58466 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms