Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab4aP56371 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab4aP56371 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rab4aP56371 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab4aP56371 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Rab4aP56371 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rab4aP56371 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab4aP56371 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.18□□□□□ -0.46
Rab4aP56371 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rab4aP56371 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rab4aP56371 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab4aP56371 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rab4aP56371 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rab4aP56371 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab4aP56371 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab4aP56371 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rab4aP56371 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab4aP56371 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab4aP56371 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Rab4aP56371 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.18□□□□□ -0.46
Rab4aP56371 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab4aP56371 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.18□□□□□ -0.46
Rab4aP56371 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab4aP56371 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab4aP56371 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab4aP56371 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rab4aP56371 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Rab4aP56371 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab4aP56371 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.17□□□□□ -0.46
Rab4aP56371 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab4aP56371 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rab4aP56371 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.17□□□□□ -0.46
Rab4aP56371 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab4aP56371 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.17□□□□□ -0.46
Rab4aP56371 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.17□□□□□ -0.46
Rab4aP56371 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab4aP56371 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.17□□□□□ -0.46
Rab4aP56371 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab4aP56371 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.17□□□□□ -0.46
Rab4aP56371 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rab4aP56371 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab4aP56371 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab4aP56371 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rab4aP56371 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Rab4aP56371 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.17□□□□□ -0.46
Rab4aP56371 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rab4aP56371 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab4aP56371 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab4aP56371 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab4aP56371 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab4aP56371 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab4aP56371 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab4aP56371 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab4aP56371 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Rab4aP56371 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.16□□□□□ -0.46
Rab4aP56371 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.16□□□□□ -0.46
Rab4aP56371 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 Gm5408-201ENSMUST00000197998 747 ntBASIC12.16□□□□□ -0.46
Rab4aP56371 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Rab4aP56371 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.16□□□□□ -0.46
Rab4aP56371 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.16□□□□□ -0.46
Rab4aP56371 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab4aP56371 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab4aP56371 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rab4aP56371 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab4aP56371 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rab4aP56371 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab4aP56371 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab4aP56371 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rab4aP56371 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab4aP56371 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rab4aP56371 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab4aP56371 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rab4aP56371 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab4aP56371 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rab4aP56371 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.15□□□□□ -0.46
Rab4aP56371 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rab4aP56371 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab4aP56371 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Rab4aP56371 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms