Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Atxn1P54254 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.26■□□□□ 0.03
Atxn1P54254 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Atxn1P54254 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Atxn1P54254 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Atxn1P54254 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Atxn1P54254 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Atxn1P54254 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Atxn1P54254 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Atxn1P54254 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atxn1P54254 Mir449b-201ENSMUST00000104833 80 ntBASIC15.25■□□□□ 0.03
Atxn1P54254 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Atxn1P54254 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.25■□□□□ 0.03
Atxn1P54254 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Atxn1P54254 Gm43125-201ENSMUST00000201724 730 ntBASIC15.25■□□□□ 0.03
Atxn1P54254 Gm7787-201ENSMUST00000216858 688 ntBASIC15.25■□□□□ 0.03
Atxn1P54254 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atxn1P54254 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Atxn1P54254 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Atxn1P54254 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atxn1P54254 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atxn1P54254 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atxn1P54254 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atxn1P54254 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.25■□□□□ 0.03
Atxn1P54254 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atxn1P54254 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Atxn1P54254 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atxn1P54254 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.25■□□□□ 0.03
Atxn1P54254 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Atxn1P54254 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Atxn1P54254 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.24■□□□□ 0.03
Atxn1P54254 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Atxn1P54254 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Atxn1P54254 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.24■□□□□ 0.03
Atxn1P54254 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.24■□□□□ 0.03
Atxn1P54254 Gm18889-201ENSMUST00000174284 929 ntBASIC15.24■□□□□ 0.03
Atxn1P54254 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 Gm27301-201ENSMUST00000184012 127 ntBASIC15.24■□□□□ 0.03
Atxn1P54254 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.24■□□□□ 0.03
Atxn1P54254 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Atxn1P54254 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Atxn1P54254 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.24■□□□□ 0.03
Atxn1P54254 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.24■□□□□ 0.03
Atxn1P54254 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Atxn1P54254 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.24■□□□□ 0.03
Atxn1P54254 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Atxn1P54254 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Atxn1P54254 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Atxn1P54254 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Atxn1P54254 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.23■□□□□ 0.03
Atxn1P54254 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.23■□□□□ 0.03
Atxn1P54254 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.23■□□□□ 0.03
Atxn1P54254 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.23■□□□□ 0.03
Atxn1P54254 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.23■□□□□ 0.03
Atxn1P54254 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.23■□□□□ 0.03
Atxn1P54254 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.23■□□□□ 0.03
Atxn1P54254 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.23■□□□□ 0.03
Atxn1P54254 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.23■□□□□ 0.03
Atxn1P54254 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.23■□□□□ 0.03
Atxn1P54254 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.23■□□□□ 0.03
Atxn1P54254 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.23■□□□□ 0.03
Atxn1P54254 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.23■□□□□ 0.03
Atxn1P54254 Gm4518-201ENSMUST00000182638 718 ntBASIC15.23■□□□□ 0.03
Atxn1P54254 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.23■□□□□ 0.03
Atxn1P54254 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.23■□□□□ 0.03
Atxn1P54254 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.23■□□□□ 0.03
Atxn1P54254 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.23■□□□□ 0.03
Atxn1P54254 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.23■□□□□ 0.03
Atxn1P54254 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms