Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pdx1P52946 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pdx1P52946 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Pdx1P52946 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pdx1P52946 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdx1P52946 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pdx1P52946 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdx1P52946 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pdx1P52946 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdx1P52946 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdx1P52946 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pdx1P52946 Gm8318-201ENSMUST00000182954 872 ntBASIC15.21■□□□□ 0.03
Pdx1P52946 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pdx1P52946 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdx1P52946 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pdx1P52946 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pdx1P52946 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pdx1P52946 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdx1P52946 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pdx1P52946 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pdx1P52946 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pdx1P52946 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.21■□□□□ 0.02
Pdx1P52946 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pdx1P52946 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Pdx1P52946 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pdx1P52946 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pdx1P52946 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pdx1P52946 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.2■□□□□ 0.02
Pdx1P52946 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pdx1P52946 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.2■□□□□ 0.02
Pdx1P52946 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Pdx1P52946 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdx1P52946 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.2■□□□□ 0.02
Pdx1P52946 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdx1P52946 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdx1P52946 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdx1P52946 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdx1P52946 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdx1P52946 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.2■□□□□ 0.02
Pdx1P52946 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pdx1P52946 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdx1P52946 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.2■□□□□ 0.02
Pdx1P52946 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.2■□□□□ 0.02
Pdx1P52946 Gm18195-201ENSMUST00000207604 706 ntBASIC15.2■□□□□ 0.02
Pdx1P52946 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
Pdx1P52946 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.2■□□□□ 0.02
Pdx1P52946 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdx1P52946 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.2■□□□□ 0.02
Pdx1P52946 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.2■□□□□ 0.02
Pdx1P52946 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdx1P52946 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdx1P52946 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.2■□□□□ 0.02
Pdx1P52946 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdx1P52946 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdx1P52946 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdx1P52946 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pdx1P52946 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdx1P52946 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdx1P52946 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.2■□□□□ 0.02
Pdx1P52946 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdx1P52946 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdx1P52946 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pdx1P52946 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdx1P52946 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pdx1P52946 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdx1P52946 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.19■□□□□ 0.02
Pdx1P52946 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdx1P52946 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pdx1P52946 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdx1P52946 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.19■□□□□ 0.02
Pdx1P52946 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pdx1P52946 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Pdx1P52946 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pdx1P52946 Gm37153-201ENSMUST00000193637 231 ntBASIC15.19■□□□□ 0.02
Pdx1P52946 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.19■□□□□ 0.02
Pdx1P52946 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.19■□□□□ 0.02
Pdx1P52946 AV026068-213ENSMUST00000223675 1171 ntBASIC15.19■□□□□ 0.02
Pdx1P52946 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.19■□□□□ 0.02
Pdx1P52946 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdx1P52946 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdx1P52946 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdx1P52946 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdx1P52946 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdx1P52946 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pdx1P52946 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pdx1P52946 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdx1P52946 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pdx1P52946 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdx1P52946 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pdx1P52946 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pdx1P52946 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdx1P52946 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdx1P52946 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdx1P52946 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdx1P52946 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdx1P52946 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdx1P52946 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pdx1P52946 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdx1P52946 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pdx1P52946 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms