Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hmga2P52927 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hmga2P52927 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.1□□□□□ -0.31
Hmga2P52927 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hmga2P52927 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hmga2P52927 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hmga2P52927 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hmga2P52927 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hmga2P52927 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hmga2P52927 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hmga2P52927 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Hmga2P52927 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Hmga2P52927 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmga2P52927 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmga2P52927 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
Hmga2P52927 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmga2P52927 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.09□□□□□ -0.31
Hmga2P52927 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmga2P52927 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.09□□□□□ -0.31
Hmga2P52927 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Hmga2P52927 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hmga2P52927 Gm37055-201ENSMUST00000191866 133 ntBASIC13.09□□□□□ -0.31
Hmga2P52927 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmga2P52927 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hmga2P52927 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.09□□□□□ -0.31
Hmga2P52927 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.09□□□□□ -0.31
Hmga2P52927 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmga2P52927 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmga2P52927 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmga2P52927 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmga2P52927 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmga2P52927 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmga2P52927 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmga2P52927 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Hmga2P52927 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmga2P52927 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmga2P52927 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hmga2P52927 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmga2P52927 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmga2P52927 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.08□□□□□ -0.31
Hmga2P52927 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmga2P52927 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmga2P52927 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmga2P52927 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmga2P52927 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Hmga2P52927 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmga2P52927 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmga2P52927 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmga2P52927 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmga2P52927 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.08□□□□□ -0.32
Hmga2P52927 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmga2P52927 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.08□□□□□ -0.32
Hmga2P52927 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.08□□□□□ -0.32
Hmga2P52927 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.08□□□□□ -0.32
Hmga2P52927 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.08□□□□□ -0.32
Hmga2P52927 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.08□□□□□ -0.32
Hmga2P52927 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmga2P52927 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Hmga2P52927 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Hmga2P52927 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmga2P52927 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmga2P52927 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Hmga2P52927 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmga2P52927 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.08□□□□□ -0.32
Hmga2P52927 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.08□□□□□ -0.32
Hmga2P52927 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmga2P52927 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.08□□□□□ -0.32
Hmga2P52927 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmga2P52927 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Hmga2P52927 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Hmga2P52927 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Hmga2P52927 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Hmga2P52927 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hmga2P52927 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmga2P52927 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.08□□□□□ -0.32
Hmga2P52927 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.08□□□□□ -0.32
Hmga2P52927 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmga2P52927 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.07□□□□□ -0.32
Hmga2P52927 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hmga2P52927 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmga2P52927 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmga2P52927 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.07□□□□□ -0.32
Hmga2P52927 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Hmga2P52927 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Hmga2P52927 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
Hmga2P52927 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Hmga2P52927 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hmga2P52927 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hmga2P52927 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hmga2P52927 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hmga2P52927 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hmga2P52927 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.07□□□□□ -0.32
Hmga2P52927 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hmga2P52927 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.07□□□□□ -0.32
Hmga2P52927 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.07□□□□□ -0.32
Hmga2P52927 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Hmga2P52927 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmga2P52927 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.07□□□□□ -0.32
Hmga2P52927 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hmga2P52927 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms