Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
TgfaP48030 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TgfaP48030 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
TgfaP48030 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TgfaP48030 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.33□□□□□ -0.28
TgfaP48030 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TgfaP48030 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TgfaP48030 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.33□□□□□ -0.28
TgfaP48030 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TgfaP48030 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TgfaP48030 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TgfaP48030 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TgfaP48030 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TgfaP48030 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TgfaP48030 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TgfaP48030 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TgfaP48030 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TgfaP48030 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TgfaP48030 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TgfaP48030 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.33□□□□□ -0.28
TgfaP48030 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.33□□□□□ -0.28
TgfaP48030 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TgfaP48030 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TgfaP48030 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.33□□□□□ -0.28
TgfaP48030 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TgfaP48030 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.33□□□□□ -0.28
TgfaP48030 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TgfaP48030 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TgfaP48030 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TgfaP48030 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TgfaP48030 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TgfaP48030 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TgfaP48030 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TgfaP48030 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TgfaP48030 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TgfaP48030 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TgfaP48030 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.32□□□□□ -0.28
TgfaP48030 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
TgfaP48030 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TgfaP48030 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TgfaP48030 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TgfaP48030 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TgfaP48030 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TgfaP48030 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.32□□□□□ -0.28
TgfaP48030 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 Gm11543-201ENSMUST00000120758 370 ntBASIC13.32□□□□□ -0.28
TgfaP48030 Gm12151-201ENSMUST00000121374 290 ntBASIC13.32□□□□□ -0.28
TgfaP48030 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
TgfaP48030 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TgfaP48030 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 Gm10499-201ENSMUST00000174094 934 ntBASIC13.32□□□□□ -0.28
TgfaP48030 Gm17837-201ENSMUST00000186435 985 ntBASIC13.32□□□□□ -0.28
TgfaP48030 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TgfaP48030 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.32□□□□□ -0.28
TgfaP48030 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.32□□□□□ -0.28
TgfaP48030 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TgfaP48030 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TgfaP48030 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.32□□□□□ -0.28
TgfaP48030 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.32□□□□□ -0.28
TgfaP48030 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TgfaP48030 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.31□□□□□ -0.28
TgfaP48030 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TgfaP48030 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TgfaP48030 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.31□□□□□ -0.28
TgfaP48030 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TgfaP48030 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TgfaP48030 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TgfaP48030 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TgfaP48030 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TgfaP48030 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TgfaP48030 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
TgfaP48030 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TgfaP48030 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TgfaP48030 Gm6973-201ENSMUST00000117080 721 ntBASIC13.31□□□□□ -0.28
TgfaP48030 Gm18737-201ENSMUST00000173594 937 ntBASIC13.31□□□□□ -0.28
TgfaP48030 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TgfaP48030 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TgfaP48030 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TgfaP48030 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TgfaP48030 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TgfaP48030 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms