Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmx3P42581 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmx3P42581 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.89□□□□□ -0.35
Hmx3P42581 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Hmx3P42581 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmx3P42581 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmx3P42581 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmx3P42581 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Hmx3P42581 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.88□□□□□ -0.35
Hmx3P42581 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.88□□□□□ -0.35
Hmx3P42581 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hmx3P42581 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.88□□□□□ -0.35
Hmx3P42581 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.88□□□□□ -0.35
Hmx3P42581 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.88□□□□□ -0.35
Hmx3P42581 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.88□□□□□ -0.35
Hmx3P42581 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Hmx3P42581 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Hmx3P42581 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.88□□□□□ -0.35
Hmx3P42581 Gm18959-201ENSMUST00000208954 655 ntBASIC12.88□□□□□ -0.35
Hmx3P42581 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.88□□□□□ -0.35
Hmx3P42581 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.88□□□□□ -0.35
Hmx3P42581 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Hmx3P42581 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Hmx3P42581 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Hmx3P42581 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Hmx3P42581 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Hmx3P42581 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.88□□□□□ -0.35
Hmx3P42581 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Hmx3P42581 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmx3P42581 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmx3P42581 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmx3P42581 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmx3P42581 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmx3P42581 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmx3P42581 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmx3P42581 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Hmx3P42581 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.87□□□□□ -0.35
Hmx3P42581 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmx3P42581 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmx3P42581 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Hmx3P42581 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Hmx3P42581 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hmx3P42581 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmx3P42581 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Hmx3P42581 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmx3P42581 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmx3P42581 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.87□□□□□ -0.35
Hmx3P42581 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.87□□□□□ -0.35
Hmx3P42581 Gm18115-201ENSMUST00000221209 621 ntBASIC12.87□□□□□ -0.35
Hmx3P42581 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmx3P42581 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Hmx3P42581 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmx3P42581 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.87□□□□□ -0.35
Hmx3P42581 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Hmx3P42581 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.87□□□□□ -0.35
Hmx3P42581 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Hmx3P42581 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Hmx3P42581 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmx3P42581 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmx3P42581 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Hmx3P42581 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmx3P42581 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmx3P42581 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Hmx3P42581 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hmx3P42581 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Hmx3P42581 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.86□□□□□ -0.35
Hmx3P42581 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hmx3P42581 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.86□□□□□ -0.35
Hmx3P42581 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmx3P42581 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmx3P42581 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmx3P42581 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Hmx3P42581 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmx3P42581 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Hmx3P42581 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Hmx3P42581 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmx3P42581 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hmx3P42581 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms