Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.15■□□□□ 0.02
Cd9P40240 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd9P40240 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Cd9P40240 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd9P40240 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.15■□□□□ 0.02
Cd9P40240 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.15■□□□□ 0.02
Cd9P40240 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cd9P40240 Gm6550-201ENSMUST00000187574 993 ntBASIC15.15■□□□□ 0.02
Cd9P40240 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.15■□□□□ 0.02
Cd9P40240 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.15■□□□□ 0.02
Cd9P40240 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd9P40240 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cd9P40240 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cd9P40240 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd9P40240 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd9P40240 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cd9P40240 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd9P40240 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cd9P40240 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.15■□□□□ 0.02
Cd9P40240 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd9P40240 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd9P40240 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cd9P40240 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd9P40240 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd9P40240 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cd9P40240 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.14■□□□□ 0.01
Cd9P40240 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd9P40240 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cd9P40240 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Cd9P40240 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd9P40240 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd9P40240 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd9P40240 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cd9P40240 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cd9P40240 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd9P40240 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd9P40240 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cd9P40240 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.14■□□□□ 0.01
Cd9P40240 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd9P40240 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cd9P40240 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cd9P40240 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.14■□□□□ 0.01
Cd9P40240 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cd9P40240 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd9P40240 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cd9P40240 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd9P40240 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.14■□□□□ 0.01
Cd9P40240 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd9P40240 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cd9P40240 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd9P40240 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cd9P40240 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cd9P40240 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd9P40240 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cd9P40240 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Cd9P40240 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd9P40240 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cd9P40240 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cd9P40240 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd9P40240 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd9P40240 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd9P40240 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cd9P40240 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cd9P40240 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cd9P40240 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd9P40240 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cd9P40240 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cd9P40240 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cd9P40240 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.13■□□□□ 0.01
Cd9P40240 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cd9P40240 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cd9P40240 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.13■□□□□ 0.01
Cd9P40240 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd9P40240 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd9P40240 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd9P40240 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cd9P40240 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cd9P40240 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd9P40240 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cd9P40240 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd9P40240 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd9P40240 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd9P40240 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cd9P40240 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cd9P40240 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cd9P40240 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cd9P40240 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd9P40240 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd9P40240 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cd9P40240 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd9P40240 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd9P40240 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.12■□□□□ 0.01
Cd9P40240 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.12■□□□□ 0.01
Cd9P40240 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.12■□□□□ 0.01
Cd9P40240 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
Cd9P40240 Gm10060-201ENSMUST00000212002 111 ntBASIC15.12■□□□□ 0.01
Cd9P40240 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cd9P40240 AV026068-213ENSMUST00000223675 1171 ntBASIC15.12■□□□□ 0.01
Cd9P40240 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cd9P40240 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms