Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rom1P32958 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rom1P32958 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rom1P32958 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.19□□□□□ -0.46
Rom1P32958 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rom1P32958 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.19□□□□□ -0.46
Rom1P32958 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Rom1P32958 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.19□□□□□ -0.46
Rom1P32958 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.19□□□□□ -0.46
Rom1P32958 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rom1P32958 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rom1P32958 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.18□□□□□ -0.46
Rom1P32958 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rom1P32958 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Gm26039-201ENSMUST00000158152 144 ntBASIC12.18□□□□□ -0.46
Rom1P32958 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.18□□□□□ -0.46
Rom1P32958 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Mir1668-201ENSMUST00000184114 107 ntBASIC12.18□□□□□ -0.46
Rom1P32958 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.18□□□□□ -0.46
Rom1P32958 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.18□□□□□ -0.46
Rom1P32958 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.18□□□□□ -0.46
Rom1P32958 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC12.18□□□□□ -0.46
Rom1P32958 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rom1P32958 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.18□□□□□ -0.46
Rom1P32958 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rom1P32958 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rom1P32958 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rom1P32958 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rom1P32958 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rom1P32958 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rom1P32958 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rom1P32958 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.17□□□□□ -0.46
Rom1P32958 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Gm14722-201ENSMUST00000118943 689 ntBASIC12.17□□□□□ -0.46
Rom1P32958 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rom1P32958 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.17□□□□□ -0.46
Rom1P32958 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.17□□□□□ -0.46
Rom1P32958 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.17□□□□□ -0.46
Rom1P32958 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.17□□□□□ -0.46
Rom1P32958 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rom1P32958 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms