Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a1P31648 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a1P31648 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Slc6a1P31648 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a1P31648 Gm6659-201ENSMUST00000174752 547 ntBASIC13.28□□□□□ -0.28
Slc6a1P31648 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a1P31648 Gm18032-201ENSMUST00000222541 538 ntBASIC13.28□□□□□ -0.28
Slc6a1P31648 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a1P31648 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a1P31648 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a1P31648 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a1P31648 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Slc6a1P31648 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a1P31648 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a1P31648 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a1P31648 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a1P31648 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Slc6a1P31648 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Slc6a1P31648 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Slc6a1P31648 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a1P31648 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc6a1P31648 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc6a1P31648 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.27□□□□□ -0.28
Slc6a1P31648 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.27□□□□□ -0.28
Slc6a1P31648 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc6a1P31648 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Slc6a1P31648 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc6a1P31648 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc6a1P31648 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc6a1P31648 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Slc6a1P31648 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc6a1P31648 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Slc6a1P31648 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Slc6a1P31648 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Slc6a1P31648 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Slc6a1P31648 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc6a1P31648 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Slc6a1P31648 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Slc6a1P31648 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc6a1P31648 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc6a1P31648 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc6a1P31648 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc6a1P31648 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc6a1P31648 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Slc6a1P31648 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc6a1P31648 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Slc6a1P31648 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc6a1P31648 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc6a1P31648 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc6a1P31648 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Slc6a1P31648 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Slc6a1P31648 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc6a1P31648 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Slc6a1P31648 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a1P31648 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a1P31648 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a1P31648 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a1P31648 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a1P31648 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a1P31648 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a1P31648 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a1P31648 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Slc6a1P31648 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a1P31648 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.26□□□□□ -0.29
Slc6a1P31648 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a1P31648 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a1P31648 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a1P31648 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a1P31648 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Slc6a1P31648 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.26□□□□□ -0.29
Slc6a1P31648 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.26□□□□□ -0.29
Slc6a1P31648 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a1P31648 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.26□□□□□ -0.29
Slc6a1P31648 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a1P31648 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a1P31648 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a1P31648 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a1P31648 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
Slc6a1P31648 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a1P31648 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a1P31648 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Slc6a1P31648 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.25□□□□□ -0.29
Slc6a1P31648 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Slc6a1P31648 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Slc6a1P31648 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.25□□□□□ -0.29
Slc6a1P31648 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Slc6a1P31648 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms