Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.63■□□□□ 0.41
Vcam1P29533 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Vcam1P29533 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Vcam1P29533 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Vcam1P29533 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vcam1P29533 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vcam1P29533 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vcam1P29533 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vcam1P29533 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vcam1P29533 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.62■□□□□ 0.41
Vcam1P29533 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Vcam1P29533 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Vcam1P29533 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.62■□□□□ 0.41
Vcam1P29533 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.62■□□□□ 0.41
Vcam1P29533 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vcam1P29533 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vcam1P29533 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vcam1P29533 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vcam1P29533 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vcam1P29533 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vcam1P29533 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vcam1P29533 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vcam1P29533 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcam1P29533 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcam1P29533 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcam1P29533 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcam1P29533 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcam1P29533 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vcam1P29533 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Vcam1P29533 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcam1P29533 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcam1P29533 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcam1P29533 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.61■□□□□ 0.41
Vcam1P29533 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vcam1P29533 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.61■□□□□ 0.41
Vcam1P29533 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcam1P29533 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vcam1P29533 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcam1P29533 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcam1P29533 Dancr-204ENSMUST00000132389 2347 ntBASIC17.61■□□□□ 0.41
Vcam1P29533 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcam1P29533 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcam1P29533 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.61■□□□□ 0.41
Vcam1P29533 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcam1P29533 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcam1P29533 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vcam1P29533 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Vcam1P29533 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Vcam1P29533 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.61■□□□□ 0.41
Vcam1P29533 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Vcam1P29533 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.6■□□□□ 0.41
Vcam1P29533 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.6■□□□□ 0.41
Vcam1P29533 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.6■□□□□ 0.41
Vcam1P29533 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.6■□□□□ 0.41
Vcam1P29533 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Gm7774-201ENSMUST00000200064 533 ntBASIC17.6■□□□□ 0.41
Vcam1P29533 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.6■□□□□ 0.41
Vcam1P29533 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vcam1P29533 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vcam1P29533 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Vcam1P29533 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vcam1P29533 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vcam1P29533 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.59■□□□□ 0.41
Vcam1P29533 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vcam1P29533 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.59■□□□□ 0.41
Vcam1P29533 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vcam1P29533 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Vcam1P29533 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.59■□□□□ 0.41
Vcam1P29533 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vcam1P29533 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.59■□□□□ 0.41
Vcam1P29533 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.59■□□□□ 0.41
Vcam1P29533 Gm15483-201ENSMUST00000120338 456 ntBASIC17.59■□□□□ 0.41
Vcam1P29533 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Vcam1P29533 Gm22175-201ENSMUST00000175007 78 ntBASIC17.59■□□□□ 0.41
Vcam1P29533 Gm10253-201ENSMUST00000194270 940 ntBASIC17.59■□□□□ 0.41
Vcam1P29533 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vcam1P29533 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.59■□□□□ 0.41
Vcam1P29533 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vcam1P29533 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms