Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.3■□□□□ 0.04
Nckap1P28660 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC15.3■□□□□ 0.04
Nckap1P28660 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nckap1P28660 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nckap1P28660 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nckap1P28660 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nckap1P28660 Gm27301-201ENSMUST00000184012 127 ntBASIC15.3■□□□□ 0.04
Nckap1P28660 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.3■□□□□ 0.04
Nckap1P28660 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
Nckap1P28660 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nckap1P28660 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nckap1P28660 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nckap1P28660 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nckap1P28660 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nckap1P28660 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.3■□□□□ 0.04
Nckap1P28660 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Nckap1P28660 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nckap1P28660 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nckap1P28660 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nckap1P28660 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Nckap1P28660 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nckap1P28660 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nckap1P28660 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.29■□□□□ 0.04
Nckap1P28660 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nckap1P28660 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nckap1P28660 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nckap1P28660 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nckap1P28660 Gm14722-201ENSMUST00000118943 689 ntBASIC15.29■□□□□ 0.04
Nckap1P28660 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.29■□□□□ 0.04
Nckap1P28660 Gm18246-201ENSMUST00000221023 728 ntBASIC15.29■□□□□ 0.04
Nckap1P28660 Chchd1-203ENSMUST00000224633 557 ntBASIC15.29■□□□□ 0.04
Nckap1P28660 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Nckap1P28660 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nckap1P28660 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nckap1P28660 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nckap1P28660 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nckap1P28660 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.29■□□□□ 0.04
Nckap1P28660 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.29■□□□□ 0.04
Nckap1P28660 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Nckap1P28660 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nckap1P28660 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nckap1P28660 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nckap1P28660 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nckap1P28660 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nckap1P28660 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nckap1P28660 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nckap1P28660 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nckap1P28660 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nckap1P28660 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nckap1P28660 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nckap1P28660 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nckap1P28660 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nckap1P28660 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.28■□□□□ 0.04
Nckap1P28660 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nckap1P28660 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nckap1P28660 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nckap1P28660 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nckap1P28660 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nckap1P28660 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nckap1P28660 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nckap1P28660 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nckap1P28660 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nckap1P28660 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.28■□□□□ 0.04
Nckap1P28660 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.28■□□□□ 0.04
Nckap1P28660 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nckap1P28660 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.27■□□□□ 0.04
Nckap1P28660 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.27■□□□□ 0.04
Nckap1P28660 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.27■□□□□ 0.04
Nckap1P28660 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nckap1P28660 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nckap1P28660 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nckap1P28660 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nckap1P28660 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nckap1P28660 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nckap1P28660 Gm13597-201ENSMUST00000121239 375 ntBASIC15.27■□□□□ 0.04
Nckap1P28660 Mir1895-201ENSMUST00000122615 79 ntBASIC15.27■□□□□ 0.04
Nckap1P28660 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nckap1P28660 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nckap1P28660 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nckap1P28660 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nckap1P28660 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nckap1P28660 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nckap1P28660 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nckap1P28660 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nckap1P28660 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.27■□□□□ 0.03
Nckap1P28660 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nckap1P28660 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nckap1P28660 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nckap1P28660 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nckap1P28660 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nckap1P28660 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nckap1P28660 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nckap1P28660 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Nckap1P28660 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nckap1P28660 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nckap1P28660 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.26■□□□□ 0.03
Nckap1P28660 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nckap1P28660 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nckap1P28660 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nckap1P28660 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms