Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cd40lgP27548 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd40lgP27548 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd40lgP27548 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd40lgP27548 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd40lgP27548 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd40lgP27548 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd40lgP27548 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd40lgP27548 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd40lgP27548 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd40lgP27548 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd40lgP27548 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd40lgP27548 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Cd40lgP27548 Gm8097-201ENSMUST00000117903 829 ntBASIC14.19□□□□□ -0.14
Cd40lgP27548 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.19□□□□□ -0.14
Cd40lgP27548 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd40lgP27548 Gm6257-201ENSMUST00000163864 910 ntBASIC14.19□□□□□ -0.14
Cd40lgP27548 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd40lgP27548 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Cd40lgP27548 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd40lgP27548 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd40lgP27548 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cd40lgP27548 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd40lgP27548 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cd40lgP27548 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cd40lgP27548 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cd40lgP27548 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd40lgP27548 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd40lgP27548 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.18□□□□□ -0.14
Cd40lgP27548 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Cd40lgP27548 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.18□□□□□ -0.14
Cd40lgP27548 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd40lgP27548 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd40lgP27548 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd40lgP27548 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd40lgP27548 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd40lgP27548 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd40lgP27548 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cd40lgP27548 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cd40lgP27548 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd40lgP27548 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.18□□□□□ -0.14
Cd40lgP27548 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.18□□□□□ -0.14
Cd40lgP27548 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd40lgP27548 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.18□□□□□ -0.14
Cd40lgP27548 Gm18733-201ENSMUST00000173950 856 ntBASIC14.18□□□□□ -0.14
Cd40lgP27548 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Cd40lgP27548 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd40lgP27548 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.18□□□□□ -0.14
Cd40lgP27548 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd40lgP27548 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd40lgP27548 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd40lgP27548 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cd40lgP27548 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd40lgP27548 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd40lgP27548 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.18□□□□□ -0.14
Cd40lgP27548 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.18□□□□□ -0.14
Cd40lgP27548 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cd40lgP27548 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd40lgP27548 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd40lgP27548 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.17□□□□□ -0.14
Cd40lgP27548 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd40lgP27548 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Cd40lgP27548 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cd40lgP27548 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Cd40lgP27548 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd40lgP27548 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Cd40lgP27548 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd40lgP27548 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.17□□□□□ -0.14
Cd40lgP27548 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cd40lgP27548 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cd40lgP27548 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Cd40lgP27548 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cd40lgP27548 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Cd40lgP27548 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cd40lgP27548 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.17□□□□□ -0.14
Cd40lgP27548 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.17□□□□□ -0.14
Cd40lgP27548 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.17□□□□□ -0.14
Cd40lgP27548 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.17□□□□□ -0.14
Cd40lgP27548 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cd40lgP27548 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.17□□□□□ -0.14
Cd40lgP27548 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd40lgP27548 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd40lgP27548 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cd40lgP27548 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Cd40lgP27548 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cd40lgP27548 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd40lgP27548 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd40lgP27548 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd40lgP27548 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cd40lgP27548 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd40lgP27548 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd40lgP27548 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd40lgP27548 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cd40lgP27548 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd40lgP27548 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd40lgP27548 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cd40lgP27548 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms