Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.75□□□□□ -0.37
Cxcl1P12850 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.75□□□□□ -0.37
Cxcl1P12850 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cxcl1P12850 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.74□□□□□ -0.37
Cxcl1P12850 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cxcl1P12850 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.74□□□□□ -0.37
Cxcl1P12850 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cxcl1P12850 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.74□□□□□ -0.37
Cxcl1P12850 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm12134-201ENSMUST00000122109 520 ntBASIC12.74□□□□□ -0.37
Cxcl1P12850 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cxcl1P12850 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.74□□□□□ -0.37
Cxcl1P12850 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.74□□□□□ -0.37
Cxcl1P12850 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm8825-201ENSMUST00000182565 998 ntBASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm4518-201ENSMUST00000182638 718 ntBASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.74□□□□□ -0.37
Cxcl1P12850 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.74□□□□□ -0.37
Cxcl1P12850 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.74□□□□□ -0.37
Cxcl1P12850 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.74□□□□□ -0.37
Cxcl1P12850 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.74□□□□□ -0.37
Cxcl1P12850 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cxcl1P12850 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cxcl1P12850 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cxcl1P12850 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Cxcl1P12850 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cxcl1P12850 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.73□□□□□ -0.37
Cxcl1P12850 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cxcl1P12850 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.73□□□□□ -0.37
Cxcl1P12850 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Gm6433-201ENSMUST00000118634 875 ntBASIC12.73□□□□□ -0.37
Cxcl1P12850 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.73□□□□□ -0.37
Cxcl1P12850 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cxcl1P12850 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms