Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl3P10855 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl3P10855 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ccl3P10855 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.55□□□□□ -0.24
Ccl3P10855 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl3P10855 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.55□□□□□ -0.24
Ccl3P10855 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.55□□□□□ -0.24
Ccl3P10855 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl3P10855 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl3P10855 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl3P10855 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl3P10855 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl3P10855 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl3P10855 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl3P10855 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl3P10855 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl3P10855 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl3P10855 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl3P10855 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ccl3P10855 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl3P10855 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl3P10855 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl3P10855 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl3P10855 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl3P10855 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl3P10855 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl3P10855 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl3P10855 Gm12428-201ENSMUST00000119844 727 ntBASIC13.54□□□□□ -0.24
Ccl3P10855 Gm11543-201ENSMUST00000120758 370 ntBASIC13.54□□□□□ -0.24
Ccl3P10855 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl3P10855 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccl3P10855 Mir6977-201ENSMUST00000184960 64 ntBASIC13.54□□□□□ -0.24
Ccl3P10855 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl3P10855 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccl3P10855 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl3P10855 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccl3P10855 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Ccl3P10855 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl3P10855 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl3P10855 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ccl3P10855 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl3P10855 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl3P10855 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Ccl3P10855 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl3P10855 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl3P10855 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccl3P10855 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccl3P10855 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl3P10855 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ccl3P10855 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ccl3P10855 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ccl3P10855 Gm18737-201ENSMUST00000173594 937 ntBASIC13.53□□□□□ -0.24
Ccl3P10855 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.53□□□□□ -0.24
Ccl3P10855 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.53□□□□□ -0.24
Ccl3P10855 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.53□□□□□ -0.24
Ccl3P10855 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ccl3P10855 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ccl3P10855 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccl3P10855 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccl3P10855 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccl3P10855 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccl3P10855 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccl3P10855 Gm2810-201ENSMUST00000118681 990 ntBASIC13.52□□□□□ -0.25
Ccl3P10855 Gm15693-201ENSMUST00000120470 637 ntBASIC13.52□□□□□ -0.25
Ccl3P10855 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.52□□□□□ -0.25
Ccl3P10855 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Ccl3P10855 Gm16026-204ENSMUST00000162652 683 ntBASIC13.52□□□□□ -0.25
Ccl3P10855 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccl3P10855 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccl3P10855 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccl3P10855 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccl3P10855 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.52□□□□□ -0.25
Ccl3P10855 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccl3P10855 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccl3P10855 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccl3P10855 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccl3P10855 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccl3P10855 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl3P10855 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms