Protein–RNA interactions for Protein: P0CB42

Alkbh1, Nucleic acid dioxygenase ALKBH1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alkbh1P0CB42 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alkbh1P0CB42 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alkbh1P0CB42 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alkbh1P0CB42 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alkbh1P0CB42 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Alkbh1P0CB42 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alkbh1P0CB42 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alkbh1P0CB42 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.42■□□□□ 0.22
Alkbh1P0CB42 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Alkbh1P0CB42 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alkbh1P0CB42 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alkbh1P0CB42 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alkbh1P0CB42 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alkbh1P0CB42 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.4■□□□□ 0.22
Alkbh1P0CB42 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Alkbh1P0CB42 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Alkbh1P0CB42 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.4■□□□□ 0.22
Alkbh1P0CB42 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
Alkbh1P0CB42 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.4■□□□□ 0.22
Alkbh1P0CB42 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.4■□□□□ 0.22
Alkbh1P0CB42 Gm9682-201ENSMUST00000197505 556 ntBASIC16.4■□□□□ 0.22
Alkbh1P0CB42 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
Alkbh1P0CB42 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.4■□□□□ 0.22
Alkbh1P0CB42 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alkbh1P0CB42 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Alkbh1P0CB42 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Alkbh1P0CB42 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alkbh1P0CB42 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alkbh1P0CB42 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alkbh1P0CB42 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Alkbh1P0CB42 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Alkbh1P0CB42 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Alkbh1P0CB42 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.39■□□□□ 0.22
Alkbh1P0CB42 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 AV026068-213ENSMUST00000223675 1171 ntBASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alkbh1P0CB42 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.38■□□□□ 0.21
Alkbh1P0CB42 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alkbh1P0CB42 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alkbh1P0CB42 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alkbh1P0CB42 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alkbh1P0CB42 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alkbh1P0CB42 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alkbh1P0CB42 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Alkbh1P0CB42 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Alkbh1P0CB42 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Alkbh1P0CB42 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Alkbh1P0CB42 Gm11764-201ENSMUST00000120221 623 ntBASIC16.38■□□□□ 0.21
Alkbh1P0CB42 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms