Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04212 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04212 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04212 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04212 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04212 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P04212 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
P04212 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04212 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
P04212 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P04212 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.51□□□□□ -0.41
P04212 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.51□□□□□ -0.41
P04212 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.51□□□□□ -0.41
P04212 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P04212 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04212 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P04212 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
P04212 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04212 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04212 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04212 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P04212 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04212 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.51□□□□□ -0.41
P04212 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
P04212 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
P04212 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P04212 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.51□□□□□ -0.41
P04212 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04212 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.51□□□□□ -0.41
P04212 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
P04212 Rprl3-201ENSMUST00000157400 290 ntBASIC12.51□□□□□ -0.41
P04212 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.51□□□□□ -0.41
P04212 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
P04212 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04212 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.51□□□□□ -0.41
P04212 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04212 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
P04212 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
P04212 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04212 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04212 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04212 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
P04212 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
P04212 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
P04212 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
P04212 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.5□□□□□ -0.41
P04212 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.5□□□□□ -0.41
P04212 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
P04212 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
P04212 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.5□□□□□ -0.41
P04212 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
P04212 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
P04212 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.5□□□□□ -0.41
P04212 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
P04212 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
P04212 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.5□□□□□ -0.41
P04212 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.5□□□□□ -0.41
P04212 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.49□□□□□ -0.41
P04212 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04212 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
P04212 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04212 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.49□□□□□ -0.41
P04212 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04212 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04212 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04212 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04212 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04212 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04212 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.49□□□□□ -0.41
P04212 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04212 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
P04212 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04212 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04212 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04212 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04212 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
P04212 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
P04212 Gm13836-201ENSMUST00000121159 501 ntBASIC12.49□□□□□ -0.41
P04212 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms