Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.71■□□□□ 0.59
Col4a1P02463 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a1P02463 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.71■□□□□ 0.59
Col4a1P02463 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Col4a1P02463 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a1P02463 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a1P02463 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a1P02463 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Col4a1P02463 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Col4a1P02463 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a1P02463 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a1P02463 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
Col4a1P02463 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a1P02463 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a1P02463 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a1P02463 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a1P02463 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a1P02463 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a1P02463 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a1P02463 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a1P02463 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a1P02463 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.7■□□□□ 0.58
Col4a1P02463 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a1P02463 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a1P02463 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Col4a1P02463 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Col4a1P02463 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.7■□□□□ 0.58
Col4a1P02463 Gm14719-201ENSMUST00000121891 340 ntBASIC18.69■□□□□ 0.58
Col4a1P02463 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a1P02463 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC18.69■□□□□ 0.58
Col4a1P02463 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC18.69■□□□□ 0.58
Col4a1P02463 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Col4a1P02463 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a1P02463 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a1P02463 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a1P02463 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.69■□□□□ 0.58
Col4a1P02463 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a1P02463 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a1P02463 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC18.69■□□□□ 0.58
Col4a1P02463 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a1P02463 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a1P02463 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a1P02463 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a1P02463 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a1P02463 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Col4a1P02463 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Col4a1P02463 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a1P02463 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a1P02463 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a1P02463 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC18.69■□□□□ 0.58
Col4a1P02463 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a1P02463 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC18.69■□□□□ 0.58
Col4a1P02463 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.69■□□□□ 0.58
Col4a1P02463 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a1P02463 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.69■□□□□ 0.58
Col4a1P02463 AC140375.2-201ENSMUST00000225283 584 ntBASIC18.69■□□□□ 0.58
Col4a1P02463 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a1P02463 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Col4a1P02463 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC18.69■□□□□ 0.58
Col4a1P02463 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a1P02463 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.69■□□□□ 0.58
Col4a1P02463 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.68■□□□□ 0.58
Col4a1P02463 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a1P02463 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a1P02463 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a1P02463 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Col4a1P02463 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a1P02463 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.68■□□□□ 0.58
Col4a1P02463 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a1P02463 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a1P02463 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a1P02463 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.68■□□□□ 0.58
Col4a1P02463 Gm11424-201ENSMUST00000121929 829 ntBASIC18.68■□□□□ 0.58
Col4a1P02463 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.68■□□□□ 0.58
Col4a1P02463 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.68■□□□□ 0.58
Col4a1P02463 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a1P02463 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a1P02463 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a1P02463 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a1P02463 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Col4a1P02463 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a1P02463 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a1P02463 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a1P02463 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a1P02463 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Col4a1P02463 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a1P02463 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a1P02463 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Col4a1P02463 Gtpbp10-211ENSMUST00000198799 648 ntBASIC18.67■□□□□ 0.58
Col4a1P02463 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.67■□□□□ 0.58
Col4a1P02463 AC132863.2-201ENSMUST00000226643 799 ntBASIC18.67■□□□□ 0.58
Col4a1P02463 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a1P02463 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Col4a1P02463 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a1P02463 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a1P02463 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a1P02463 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a1P02463 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a1P02463 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Col4a1P02463 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms