Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.94□□□□□ -0.18
DhfrP00375 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.94□□□□□ -0.18
DhfrP00375 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.94□□□□□ -0.18
DhfrP00375 Gm44450-201ENSMUST00000199528 114 ntBASIC13.94□□□□□ -0.18
DhfrP00375 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DhfrP00375 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.94□□□□□ -0.18
DhfrP00375 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DhfrP00375 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
DhfrP00375 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
DhfrP00375 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DhfrP00375 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DhfrP00375 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
DhfrP00375 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
DhfrP00375 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
DhfrP00375 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
DhfrP00375 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DhfrP00375 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
DhfrP00375 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
DhfrP00375 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
DhfrP00375 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
DhfrP00375 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
DhfrP00375 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
DhfrP00375 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.93□□□□□ -0.18
DhfrP00375 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
DhfrP00375 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.93□□□□□ -0.18
DhfrP00375 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
DhfrP00375 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.93□□□□□ -0.18
DhfrP00375 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
DhfrP00375 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DhfrP00375 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.93□□□□□ -0.18
DhfrP00375 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.93□□□□□ -0.18
DhfrP00375 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.92□□□□□ -0.18
DhfrP00375 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
DhfrP00375 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
DhfrP00375 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.92□□□□□ -0.18
DhfrP00375 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.92□□□□□ -0.18
DhfrP00375 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
DhfrP00375 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.92□□□□□ -0.18
DhfrP00375 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
DhfrP00375 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
DhfrP00375 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
DhfrP00375 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
DhfrP00375 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
DhfrP00375 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DhfrP00375 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms