Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.72■□□□□ 0.11
ShdO88834 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ShdO88834 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ShdO88834 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ShdO88834 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.72■□□□□ 0.11
ShdO88834 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ShdO88834 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ShdO88834 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ShdO88834 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ShdO88834 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.72■□□□□ 0.11
ShdO88834 Gm6089-201ENSMUST00000197666 938 ntBASIC15.72■□□□□ 0.11
ShdO88834 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
ShdO88834 Rps4l-201ENSMUST00000071745 943 ntBASIC15.72■□□□□ 0.11
ShdO88834 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
ShdO88834 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ShdO88834 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ShdO88834 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.72■□□□□ 0.11
ShdO88834 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ShdO88834 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ShdO88834 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ShdO88834 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
ShdO88834 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ShdO88834 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ShdO88834 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ShdO88834 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ShdO88834 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ShdO88834 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
ShdO88834 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.71■□□□□ 0.11
ShdO88834 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ShdO88834 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ShdO88834 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ShdO88834 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ShdO88834 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ShdO88834 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.71■□□□□ 0.11
ShdO88834 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.71■□□□□ 0.11
ShdO88834 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.71■□□□□ 0.11
ShdO88834 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.71■□□□□ 0.11
ShdO88834 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ShdO88834 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
ShdO88834 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.71■□□□□ 0.11
ShdO88834 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.71■□□□□ 0.11
ShdO88834 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.71■□□□□ 0.11
ShdO88834 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ShdO88834 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ShdO88834 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
ShdO88834 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ShdO88834 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ShdO88834 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ShdO88834 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ShdO88834 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ShdO88834 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ShdO88834 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
ShdO88834 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ShdO88834 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ShdO88834 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ShdO88834 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ShdO88834 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ShdO88834 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ShdO88834 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.7■□□□□ 0.1
ShdO88834 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.7■□□□□ 0.1
ShdO88834 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.7■□□□□ 0.1
ShdO88834 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
ShdO88834 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
ShdO88834 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ShdO88834 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.7■□□□□ 0.1
ShdO88834 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ShdO88834 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
ShdO88834 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ShdO88834 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ShdO88834 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ShdO88834 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
ShdO88834 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ShdO88834 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.69■□□□□ 0.1
ShdO88834 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ShdO88834 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ShdO88834 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ShdO88834 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ShdO88834 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ShdO88834 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
ShdO88834 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ShdO88834 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ShdO88834 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ShdO88834 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ShdO88834 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ShdO88834 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ShdO88834 Gm15173-201ENSMUST00000122049 433 ntBASIC15.69■□□□□ 0.1
ShdO88834 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ShdO88834 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ShdO88834 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ShdO88834 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.69■□□□□ 0.1
ShdO88834 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ShdO88834 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ShdO88834 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ShdO88834 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.69■□□□□ 0.1
ShdO88834 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ShdO88834 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ShdO88834 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ShdO88834 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
ShdO88834 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ShdO88834 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms