Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ClppO88696 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ClppO88696 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
ClppO88696 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ClppO88696 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ClppO88696 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ClppO88696 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
ClppO88696 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClppO88696 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClppO88696 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
ClppO88696 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClppO88696 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.01□□□□□ -0.01
ClppO88696 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClppO88696 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClppO88696 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClppO88696 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClppO88696 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
ClppO88696 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ClppO88696 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClppO88696 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.01□□□□□ -0.01
ClppO88696 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.01□□□□□ -0.01
ClppO88696 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClppO88696 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.01□□□□□ -0.01
ClppO88696 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.01□□□□□ -0.01
ClppO88696 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.01□□□□□ -0.01
ClppO88696 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.01□□□□□ -0.01
ClppO88696 Gm14140-201ENSMUST00000119999 995 ntBASIC15.01□□□□□ -0.01
ClppO88696 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.01□□□□□ -0.01
ClppO88696 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.01□□□□□ -0.01
ClppO88696 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.01□□□□□ -0.01
ClppO88696 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
ClppO88696 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.01□□□□□ -0.01
ClppO88696 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.01□□□□□ -0.01
ClppO88696 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.01□□□□□ -0.01
ClppO88696 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.01□□□□□ -0.01
ClppO88696 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.01□□□□□ -0.01
ClppO88696 Gm8825-201ENSMUST00000182565 998 ntBASIC15.01□□□□□ -0.01
ClppO88696 Gm4518-201ENSMUST00000182638 718 ntBASIC15.01□□□□□ -0.01
ClppO88696 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.01□□□□□ -0.01
ClppO88696 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
ClppO88696 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.01□□□□□ -0.01
ClppO88696 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.01□□□□□ -0.01
ClppO88696 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClppO88696 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClppO88696 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClppO88696 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClppO88696 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
ClppO88696 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.01□□□□□ -0.01
ClppO88696 Gm15590-201ENSMUST00000078419 552 ntBASIC15.01□□□□□ -0.01
ClppO88696 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.01□□□□□ -0.01
ClppO88696 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClppO88696 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ClppO88696 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClppO88696 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClppO88696 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClppO88696 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.01□□□□□ -0.01
ClppO88696 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
ClppO88696 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15□□□□□ -0.01
ClppO88696 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15□□□□□ -0.01
ClppO88696 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ClppO88696 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15□□□□□ -0.01
ClppO88696 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
ClppO88696 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ClppO88696 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ClppO88696 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ClppO88696 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ClppO88696 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ClppO88696 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
ClppO88696 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15□□□□□ -0.01
ClppO88696 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
ClppO88696 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ClppO88696 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15□□□□□ -0.01
ClppO88696 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
ClppO88696 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15□□□□□ -0.01
ClppO88696 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15□□□□□ -0.01
ClppO88696 Gm5264-201ENSMUST00000190584 848 ntBASIC15□□□□□ -0.01
ClppO88696 Gm45683-201ENSMUST00000210825 1247 ntBASIC15□□□□□ -0.01
ClppO88696 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15□□□□□ -0.01
ClppO88696 Gm18622-201ENSMUST00000219361 595 ntBASIC15□□□□□ -0.01
ClppO88696 AC154222.1-201ENSMUST00000223882 475 ntBASIC15□□□□□ -0.01
ClppO88696 AC159093.1-201ENSMUST00000227779 380 ntBASIC15□□□□□ -0.01
ClppO88696 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15□□□□□ -0.01
ClppO88696 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ClppO88696 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
ClppO88696 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ClppO88696 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ClppO88696 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ClppO88696 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
ClppO88696 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15□□□□□ -0.01
ClppO88696 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ClppO88696 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ClppO88696 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
ClppO88696 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ClppO88696 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.99□□□□□ -0.01
ClppO88696 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
ClppO88696 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ClppO88696 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
ClppO88696 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
ClppO88696 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ClppO88696 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms