Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn1O88551 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn1O88551 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn1O88551 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn1O88551 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn1O88551 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn1O88551 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn1O88551 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.18□□□□□ -0.3
Cldn1O88551 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Cldn1O88551 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.18□□□□□ -0.3
Cldn1O88551 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn1O88551 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cldn1O88551 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.18□□□□□ -0.3
Cldn1O88551 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn1O88551 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.18□□□□□ -0.3
Cldn1O88551 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.18□□□□□ -0.3
Cldn1O88551 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn1O88551 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn1O88551 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn1O88551 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn1O88551 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn1O88551 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn1O88551 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn1O88551 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn1O88551 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cldn1O88551 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn1O88551 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn1O88551 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn1O88551 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cldn1O88551 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.17□□□□□ -0.3
Cldn1O88551 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.17□□□□□ -0.3
Cldn1O88551 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.17□□□□□ -0.3
Cldn1O88551 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn1O88551 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cldn1O88551 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cldn1O88551 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn1O88551 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn1O88551 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cldn1O88551 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn1O88551 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn1O88551 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cldn1O88551 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn1O88551 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn1O88551 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.17□□□□□ -0.3
Cldn1O88551 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Cldn1O88551 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Cldn1O88551 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn1O88551 Gm25948-201ENSMUST00000175334 112 ntBASIC13.17□□□□□ -0.3
Cldn1O88551 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.17□□□□□ -0.3
Cldn1O88551 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.17□□□□□ -0.3
Cldn1O88551 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn1O88551 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn1O88551 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn1O88551 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.17□□□□□ -0.3
Cldn1O88551 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn1O88551 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn1O88551 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn1O88551 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn1O88551 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn1O88551 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn1O88551 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cldn1O88551 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn1O88551 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Cldn1O88551 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn1O88551 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.16□□□□□ -0.3
Cldn1O88551 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.16□□□□□ -0.3
Cldn1O88551 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn1O88551 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.16□□□□□ -0.3
Cldn1O88551 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn1O88551 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cldn1O88551 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn1O88551 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn1O88551 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Cldn1O88551 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn1O88551 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.16□□□□□ -0.3
Cldn1O88551 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.16□□□□□ -0.3
Cldn1O88551 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.16□□□□□ -0.3
Cldn1O88551 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.16□□□□□ -0.3
Cldn1O88551 Gm45747-201ENSMUST00000212203 999 ntBASIC13.16□□□□□ -0.3
Cldn1O88551 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn1O88551 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.16□□□□□ -0.3
Cldn1O88551 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn1O88551 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn1O88551 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cldn1O88551 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn1O88551 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn1O88551 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.16□□□□□ -0.3
Cldn1O88551 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Cldn1O88551 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn1O88551 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn1O88551 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn1O88551 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn1O88551 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.16□□□□□ -0.3
Cldn1O88551 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn1O88551 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.16□□□□□ -0.3
Cldn1O88551 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.16□□□□□ -0.3
Cldn1O88551 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cldn1O88551 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cldn1O88551 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms