Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cops3O88543 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops3O88543 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops3O88543 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops3O88543 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops3O88543 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops3O88543 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops3O88543 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops3O88543 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.8□□□□□ -0.2
Cops3O88543 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cops3O88543 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops3O88543 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops3O88543 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cops3O88543 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops3O88543 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cops3O88543 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cops3O88543 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.79□□□□□ -0.2
Cops3O88543 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Cops3O88543 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.79□□□□□ -0.2
Cops3O88543 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cops3O88543 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.79□□□□□ -0.2
Cops3O88543 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cops3O88543 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.78□□□□□ -0.2
Cops3O88543 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cops3O88543 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.78□□□□□ -0.2
Cops3O88543 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cops3O88543 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cops3O88543 Gm11950-201ENSMUST00000121615 838 ntBASIC13.78□□□□□ -0.2
Cops3O88543 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.78□□□□□ -0.2
Cops3O88543 Gm10231-201ENSMUST00000181584 441 ntBASIC13.78□□□□□ -0.2
Cops3O88543 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Gm10175-202ENSMUST00000208752 441 ntBASIC13.78□□□□□ -0.2
Cops3O88543 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.78□□□□□ -0.2
Cops3O88543 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cops3O88543 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.78□□□□□ -0.2
Cops3O88543 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cops3O88543 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Cops3O88543 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cops3O88543 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cops3O88543 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cops3O88543 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cops3O88543 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cops3O88543 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.77□□□□□ -0.2
Cops3O88543 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cops3O88543 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Cops3O88543 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cops3O88543 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cops3O88543 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms