Protein–RNA interactions for Protein: O88509

Dnmt3b, DNA (cytosine-5)-methyltransferase 3B, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3bO88509 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Dnmt3bO88509 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Dnmt3bO88509 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Dnmt3bO88509 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Dnmt3bO88509 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Dnmt3bO88509 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3bO88509 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Dnmt3bO88509 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Dnmt3bO88509 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Dnmt3bO88509 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3bO88509 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3bO88509 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Dnmt3bO88509 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3bO88509 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3bO88509 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.86□□□□□ -0.03
Dnmt3bO88509 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3bO88509 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3bO88509 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3bO88509 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3bO88509 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.86□□□□□ -0.03
Dnmt3bO88509 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3bO88509 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3bO88509 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3bO88509 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3bO88509 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Dnmt3bO88509 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3bO88509 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Dnmt3bO88509 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.85□□□□□ -0.03
Dnmt3bO88509 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.85□□□□□ -0.03
Dnmt3bO88509 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.85□□□□□ -0.03
Dnmt3bO88509 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Dnmt3bO88509 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Dnmt3bO88509 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Dnmt3bO88509 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Dnmt3bO88509 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Dnmt3bO88509 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Dnmt3bO88509 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Dnmt3bO88509 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Dnmt3bO88509 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Dnmt3bO88509 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Dnmt3bO88509 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Dnmt3bO88509 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Dnmt3bO88509 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.84□□□□□ -0.03
Dnmt3bO88509 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.84□□□□□ -0.03
Dnmt3bO88509 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.84□□□□□ -0.03
Dnmt3bO88509 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.84□□□□□ -0.03
Dnmt3bO88509 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Dnmt3bO88509 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Dnmt3bO88509 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Dnmt3bO88509 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.84□□□□□ -0.03
Dnmt3bO88509 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Dnmt3bO88509 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Dnmt3bO88509 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Dnmt3bO88509 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Dnmt3bO88509 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Dnmt3bO88509 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Dnmt3bO88509 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Dnmt3bO88509 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Dnmt3bO88509 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Dnmt3bO88509 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Dnmt3bO88509 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Dnmt3bO88509 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Dnmt3bO88509 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.83□□□□□ -0.04
Dnmt3bO88509 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Dnmt3bO88509 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Dnmt3bO88509 Gm2213-201ENSMUST00000197485 688 ntBASIC14.83□□□□□ -0.04
Dnmt3bO88509 Gm6376-201ENSMUST00000209407 580 ntBASIC14.83□□□□□ -0.04
Dnmt3bO88509 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.83□□□□□ -0.04
Dnmt3bO88509 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.83□□□□□ -0.04
Dnmt3bO88509 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.83□□□□□ -0.04
Dnmt3bO88509 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Dnmt3bO88509 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms