Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.87□□□□□ -0.03
Cacna1hO88427 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.87□□□□□ -0.03
Cacna1hO88427 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.87□□□□□ -0.03
Cacna1hO88427 Gm27731-201ENSMUST00000185192 107 ntBASIC14.87□□□□□ -0.03
Cacna1hO88427 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cacna1hO88427 Dupd1-202ENSMUST00000224735 548 ntBASIC14.87□□□□□ -0.03
Cacna1hO88427 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cacna1hO88427 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cacna1hO88427 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.87□□□□□ -0.03
Cacna1hO88427 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.87□□□□□ -0.03
Cacna1hO88427 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.87□□□□□ -0.03
Cacna1hO88427 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1hO88427 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1hO88427 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1hO88427 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1hO88427 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.86□□□□□ -0.03
Cacna1hO88427 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cacna1hO88427 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1hO88427 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cacna1hO88427 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1hO88427 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1hO88427 Gm12390-201ENSMUST00000117897 397 ntBASIC14.86□□□□□ -0.03
Cacna1hO88427 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.86□□□□□ -0.03
Cacna1hO88427 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.86□□□□□ -0.03
Cacna1hO88427 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1hO88427 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1hO88427 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1hO88427 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1hO88427 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Cacna1hO88427 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1hO88427 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1hO88427 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1hO88427 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cacna1hO88427 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
Cacna1hO88427 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.85□□□□□ -0.03
Cacna1hO88427 Gm27701-201ENSMUST00000184498 110 ntBASIC14.85□□□□□ -0.03
Cacna1hO88427 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.85□□□□□ -0.03
Cacna1hO88427 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1hO88427 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cacna1hO88427 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1hO88427 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1hO88427 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1hO88427 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cacna1hO88427 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1hO88427 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1hO88427 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cacna1hO88427 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.85□□□□□ -0.03
Cacna1hO88427 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.85□□□□□ -0.03
Cacna1hO88427 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.85□□□□□ -0.03
Cacna1hO88427 Mir6392-201ENSMUST00000184924 108 ntBASIC14.85□□□□□ -0.03
Cacna1hO88427 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1hO88427 Gm9797-201ENSMUST00000052902 613 ntBASIC14.85□□□□□ -0.03
Cacna1hO88427 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1hO88427 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1hO88427 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1hO88427 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1hO88427 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cacna1hO88427 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.85□□□□□ -0.03
Cacna1hO88427 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cacna1hO88427 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 Gm24543-201ENSMUST00000103867 82 ntBASIC14.84□□□□□ -0.03
Cacna1hO88427 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cacna1hO88427 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.84□□□□□ -0.03
Cacna1hO88427 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Cacna1hO88427 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.84□□□□□ -0.03
Cacna1hO88427 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Cacna1hO88427 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cacna1hO88427 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Cacna1hO88427 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 Haglr-201ENSMUST00000100000 2085 ntBASIC14.84□□□□□ -0.03
Cacna1hO88427 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.84□□□□□ -0.03
Cacna1hO88427 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.84□□□□□ -0.03
Cacna1hO88427 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.84□□□□□ -0.03
Cacna1hO88427 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.84□□□□□ -0.03
Cacna1hO88427 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cacna1hO88427 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms