Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Tgfbr3O88393 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Gm24158-201ENSMUST00000175263 71 ntBASIC14.59□□□□□ -0.07
Tgfbr3O88393 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tgfbr3O88393 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tgfbr3O88393 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tgfbr3O88393 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Tgfbr3O88393 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tgfbr3O88393 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tgfbr3O88393 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tgfbr3O88393 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Tgfbr3O88393 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tgfbr3O88393 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tgfbr3O88393 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.58□□□□□ -0.08
Tgfbr3O88393 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.58□□□□□ -0.08
Tgfbr3O88393 Gm27622-201ENSMUST00000183779 60 ntBASIC14.58□□□□□ -0.08
Tgfbr3O88393 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.58□□□□□ -0.08
Tgfbr3O88393 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.58□□□□□ -0.08
Tgfbr3O88393 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.58□□□□□ -0.08
Tgfbr3O88393 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tgfbr3O88393 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tgfbr3O88393 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.58□□□□□ -0.08
Tgfbr3O88393 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.58□□□□□ -0.08
Tgfbr3O88393 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tgfbr3O88393 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tgfbr3O88393 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tgfbr3O88393 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
Tgfbr3O88393 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Tgfbr3O88393 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tgfbr3O88393 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Tgfbr3O88393 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tgfbr3O88393 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Tgfbr3O88393 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tgfbr3O88393 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.57□□□□□ -0.08
Tgfbr3O88393 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.57□□□□□ -0.08
Tgfbr3O88393 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.57□□□□□ -0.08
Tgfbr3O88393 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Tgfbr3O88393 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tgfbr3O88393 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tgfbr3O88393 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tgfbr3O88393 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tgfbr3O88393 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tgfbr3O88393 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tgfbr3O88393 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tgfbr3O88393 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tgfbr3O88393 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tgfbr3O88393 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms