Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1bO88384 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1bO88384 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1bO88384 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1bO88384 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1bO88384 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1bO88384 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Vti1bO88384 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1bO88384 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Vti1bO88384 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Vti1bO88384 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Vti1bO88384 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.69□□□□□ -0.06
Vti1bO88384 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.69□□□□□ -0.06
Vti1bO88384 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Vti1bO88384 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Vti1bO88384 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.69□□□□□ -0.06
Vti1bO88384 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 BC037039-201ENSMUST00000192003 2205 ntBASIC14.69□□□□□ -0.06
Vti1bO88384 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Vti1bO88384 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vti1bO88384 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1bO88384 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1bO88384 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1bO88384 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Vti1bO88384 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1bO88384 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1bO88384 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Vti1bO88384 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1bO88384 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1bO88384 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.68□□□□□ -0.06
Vti1bO88384 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Vti1bO88384 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1bO88384 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Vti1bO88384 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Vti1bO88384 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1bO88384 Mir3081-201ENSMUST00000175305 84 ntBASIC14.68□□□□□ -0.06
Vti1bO88384 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1bO88384 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1bO88384 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Vti1bO88384 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1bO88384 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
Vti1bO88384 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1bO88384 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1bO88384 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1bO88384 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1bO88384 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1bO88384 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Vti1bO88384 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vti1bO88384 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.67□□□□□ -0.06
Vti1bO88384 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1bO88384 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1bO88384 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.67□□□□□ -0.06
Vti1bO88384 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1bO88384 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1bO88384 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1bO88384 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1bO88384 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1bO88384 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.67□□□□□ -0.06
Vti1bO88384 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Vti1bO88384 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1bO88384 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.67□□□□□ -0.06
Vti1bO88384 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1bO88384 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.67□□□□□ -0.06
Vti1bO88384 Ank2-226ENSMUST00000189368 339 ntBASIC14.67□□□□□ -0.06
Vti1bO88384 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1bO88384 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1bO88384 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1bO88384 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1bO88384 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1bO88384 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Vti1bO88384 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1bO88384 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.67□□□□□ -0.06
Vti1bO88384 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Vti1bO88384 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1bO88384 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Vti1bO88384 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Vti1bO88384 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vti1bO88384 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Vti1bO88384 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms