Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.74■□□□□ 0.75
Ubr1O70481 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr1O70481 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr1O70481 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr1O70481 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.74■□□□□ 0.75
Ubr1O70481 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr1O70481 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr1O70481 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr1O70481 App-207ENSMUST00000227737 2827 ntBASIC19.74■□□□□ 0.75
Ubr1O70481 Gm6539-201ENSMUST00000119157 1064 ntBASIC19.74■□□□□ 0.75
Ubr1O70481 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ubr1O70481 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr1O70481 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC19.74■□□□□ 0.75
Ubr1O70481 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr1O70481 Gm9063-201ENSMUST00000223299 582 ntBASIC19.74■□□□□ 0.75
Ubr1O70481 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr1O70481 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr1O70481 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubr1O70481 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr1O70481 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ubr1O70481 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr1O70481 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr1O70481 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr1O70481 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr1O70481 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr1O70481 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr1O70481 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr1O70481 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr1O70481 Gm24543-201ENSMUST00000103867 82 ntBASIC19.73■□□□□ 0.75
Ubr1O70481 Gm13464-201ENSMUST00000119418 935 ntBASIC19.73■□□□□ 0.75
Ubr1O70481 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC19.73■□□□□ 0.75
Ubr1O70481 Mir8102-201ENSMUST00000184148 139 ntBASIC19.73■□□□□ 0.75
Ubr1O70481 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr1O70481 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ubr1O70481 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ubr1O70481 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr1O70481 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ubr1O70481 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr1O70481 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC19.73■□□□□ 0.75
Ubr1O70481 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ubr1O70481 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubr1O70481 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr1O70481 Gm24694-201ENSMUST00000180054 110 ntBASIC19.72■□□□□ 0.75
Ubr1O70481 Gm27663-201ENSMUST00000184839 110 ntBASIC19.72■□□□□ 0.75
Ubr1O70481 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC19.72■□□□□ 0.75
Ubr1O70481 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ubr1O70481 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr1O70481 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr1O70481 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr1O70481 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Ubr1O70481 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr1O70481 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr1O70481 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Ubr1O70481 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr1O70481 H2-Pa-201ENSMUST00000182803 626 ntBASIC19.72■□□□□ 0.75
Ubr1O70481 Gm44344-201ENSMUST00000200287 129 ntBASIC19.72■□□□□ 0.75
Ubr1O70481 Gm5186-201ENSMUST00000218781 920 ntBASIC19.72■□□□□ 0.75
Ubr1O70481 Arhgef33-209ENSMUST00000225223 714 ntBASIC19.72■□□□□ 0.75
Ubr1O70481 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr1O70481 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr1O70481 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr1O70481 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ubr1O70481 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.71■□□□□ 0.75
Ubr1O70481 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ubr1O70481 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubr1O70481 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubr1O70481 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ubr1O70481 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC19.71■□□□□ 0.75
Ubr1O70481 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ubr1O70481 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ubr1O70481 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubr1O70481 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubr1O70481 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ubr1O70481 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubr1O70481 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.71■□□□□ 0.75
Ubr1O70481 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubr1O70481 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubr1O70481 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubr1O70481 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubr1O70481 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ubr1O70481 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ubr1O70481 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr1O70481 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr1O70481 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr1O70481 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr1O70481 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr1O70481 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr1O70481 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ubr1O70481 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr1O70481 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr1O70481 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr1O70481 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Ubr1O70481 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC19.7■□□□□ 0.74
Ubr1O70481 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ubr1O70481 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC19.7■□□□□ 0.74
Ubr1O70481 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr1O70481 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC19.7■□□□□ 0.74
Ubr1O70481 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr1O70481 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubr1O70481 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms